| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_5265 |
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| Symbol | |
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| ID | 5737223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009974 |
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| Strand | - |
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| Start bp | 40382 |
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| End bp | 41236 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641282429 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001548020 |
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| Protein GI | 159901775 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.487256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTAACTC CAAGTATAGT CCACCTGGCT CTCATTAATT TTGCACCACT TTCGTTATAC
CACCTCTTGG AGAGTCAAGG GCGGTATGGG GAGGCGCAGC GCTTGTATGA ACGGGCCTTG
GCGGTGCGGG AAGCGGTGTT GGGGGCGGAG CATCCCGATA CGGCGACGAG TGTGCACAAT
CTGGCTTCGG TCTTGAAGCG GCAAGGGCGG TATGCTGAGG CGCAGCGCTT GTATGAACGG
GCCTTGGCGG TGCGGGAAAC GGTGTTGGGG GCGGAGCATC CCAATACGGC GTGGAGTGTG
AACAATCTGG CGTTGGTCTT GGAGAGTCAA GGGCGGTATG CTGAGGCGCA GCGCTTGTTT
GAACGGGCCT TGGCGATCAG GGAAGCGGTG TTGGGGGCGG AGCATCCCGC TACGGCGACG
AGTGTGAACA ATCTGGCGGT GGTCTTGGAG AGTCAAGGGC GGTATGCTGA GGCGCAGCGC
TTGTATGAAC GGGCCTTGGC GGTGCGGGAA GCGGTGTTGG GGGCGGAGCA TCCCGATACG
GCGACGAGTG TGAACAATCT GGCGTTGGTC TTGAAGCGGC AAGGGCGGTA TGCTGAGGCG
CAGCGCTTGT ATGAACGGGC ATTGGCTATC TATGAAGCAG TGTTGGGGGC GGAGCATCCC
GATACGGCGA CGAGTGTGAA CAATCTGGCG GTGGTCTTAG AGCGTCAAGG GCGGTATGGG
GAGGCGCAGC GCTTGTATGA ACGGGCATTG GCTATCTATG AAGCAGTGTT GGGGTCCGAG
CATCCCGATA CCCAGATTAT TCGTGCGAAT CTCGTCTCTT TACAAGCCAT CATGAAGACA
AAAGGCCAGT CGTAG
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| Protein sequence | MVTPSIVHLA LINFAPLSLY HLLESQGRYG EAQRLYERAL AVREAVLGAE HPDTATSVHN
LASVLKRQGR YAEAQRLYER ALAVRETVLG AEHPNTAWSV NNLALVLESQ GRYAEAQRLF
ERALAIREAV LGAEHPATAT SVNNLAVVLE SQGRYAEAQR LYERALAVRE AVLGAEHPDT
ATSVNNLALV LKRQGRYAEA QRLYERALAI YEAVLGAEHP DTATSVNNLA VVLERQGRYG
EAQRLYERAL AIYEAVLGSE HPDTQIIRAN LVSLQAIMKT KGQS
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