Gene Haur_5149 details

Gene Information

• Locus tag: Haur_5149
• ID: 5737107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009973
• Strand: -
• Start bp: 213995
• End bp: 217312
• Gene Length: 3318 bp
• Protein Length: 1105 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641282314
• Product: TPR repeat-containing protein
• Protein accession: YP_001547905
• Protein GI: 159901659
• COG category: [R] General function prediction only
• COG ID: [COG0457] FOG: TPR repeat

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000182587
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACTTAC TCGATATTCA ACACAAAATC TCAAGGCTCA TGGCCCGGTT TGTCGAAGAA 
GTAAAAAGTT CCACAGCGAT GGGTCATAGT GATATTAATC GTGTTGCTGA AACGGTGCTG 
ATTCCGCTCT TAGGCCGTGT CTATGAATGC CCCAGTTTAC AGAATCTCAA TAGTCTCCAT 
CCCAATTATC CAGCGGTTGA TTTAGGGGAT GTAGCCCGTC GGATCGCCTT TCAGGTCACG 
ACAACGCCGG ATAGTAAAAA AATCAAAGAT ACCCTCACCA CGTTCATCGC TCATAACCTG 
CATACCCAGT TTGATACGGT GTATGTATAT ATTTTGACGG AAAAACAACA CTCATATAGT 
CCTGCTATTT TTAGTACTAT CACCGGCAAT CACCTCCTCT TTGATCCAAA AAGACATATC 
CTTGATGCGA ATGATCTGCT GAAACAGATT GCTACCTACC ACGTTGACAA GGCCCAGCAA 
ATTCTCACGA TACTTGAGGC GAATTTTGAT ACGCCCATTG ATCCCCTTGC TCATGCGCTT 
GCCGTATATG GAACATTGCC GCTGGATTAT GTTCCTATGG CACGGTTGGA TCTGCCCCAA 
GCCTCACGCA TTCCCTTTGA ATCGAGTGCC TATTTTGTTG GGCGCGAAGC CGAATTGAAA 
GCTTTAGCCC GCGCGATTAT CCAAACCCAA CCGACCGTCG TTGTGCCTGC GGTTACGACC 
GGACTGGGGG GGATTGGCAA AACGAGTCTG GTGACGGAAT TTGCCTATCG CTATGGGGTC 
TATTTTCATG GCGGGATATT TTGGTTGAAC TGTGCTGATG CTAATCAGGT GGCGAGCCAG 
ATTGCAGCCT GTGCGGTTGG TTTGAAGATT GATACTACTG GGATGGCGCT CGATGAACAG 
GTGCAGCAGG TTTTGTATGC CTGGCAATCT CCGATGCCCC GCTTGCTGAT TTTCGATAAC 
TGTGAAGATC CAGCGATTCT TACGCAGTGG AAGCCCACTA TTGGTGGTTG TCGGGTGCTG 
GTGACGGCGC GGTCAGATCA GTGGCCAACG CTGACGCAGA TTCGTTTAGG GTTGCTCTCA 
CCTGTCGAAA GTCGCGCGTT ATTGCAGCGA CTCTGCACGC GGCTGACTGA CACCGCAGCT 
GATGCGATTG CCGAGGATCT AGGGCATTTG CCATTGGCCT TGCACCTAGC AGGCAGTTAT 
CTTAATACCT ATTCCCATCA CACGGTCGAG CAGTACCGCA CGGAGTTAAC CATTGCCCAC 
CGCTCGCTCA AGGGGCGAGG GGCGTTTCCA TCCCCAACCC AGCATGAACT GGATGTGGAA 
GCCACTTTCA TGGTGAGCGT GAATCAGCTT GATCCAAATG ATCCAATCGA TGCGCTCGCC 
TTGGGCATGC TGGATGGTGC TGCGTGGTGT GCGCCAAGCG TTCCCCTTCC GCGCTATGTG 
ATACTATCGT TCGTTCCCGA TGGAACGGAT GGTGATGATG CCGTTGATGC GCTGCGGCGT 
TTGCAAGCAT TGGGCTTATT GGATGGTATC GAGACAGTGA TCTTACATCG CTTGCTCGCC 
CAAGTCATTC ATGTCCATAT GGGATGGTCT GCGACATTGG CGCTGGTAGA GCAGCGGATG 
GTCGCTGCGG CGGAACAAGC GCATAAGACG GGGATTCCGA AGCAGATGAA TCCGCTCGAA 
CCCCATCTGC GGGGTATGAC GCTCCGGGTG TTAGATCGTG ATACAGAACA AACGGCACGA 
CTTGCAACGA ACCTTGGACT GTTTGCACAA CACCAAGGAT GGTATGCAGA GGCACAGGCG 
CTACATGAAC GGGCGTTTGG TATACGAAGA GTGCTTGTTG GTGAAAACCA TTCTTCTACG 
GCAATGAGCA TCAATAATCT TGCAGAAGCG TTACATCAGC AAGGGCGGTA TTTGGAGGCG 
CAGGACTTAT TTGAACGGGC GTTGGCGGTG CGGGAAGTGG TGTTGGGGTT GGATCATCCC 
GATACGGCAC GGAGTGTGAA CAATCTGGCG TTGGTCTTGG AGAGTCAAGG GCGGTATTCG 
GAGGCGCAGG ACTTATTTGA ACGGGCGTTG GCGGTGCGGG AAGCGGTGTT GGGGTTGGAT 
CATCCCGATA CGGCGGTGAG TGTGAACAAT CTGGCATCGG TTTTGGAGAG TCAAGGGCGG 
TATTCGGAGG CCCGAGGCTT GTATGAACGG GCGTTGGAGG TCACGGAAGC AGTTTTAGGT 
AGGGAACATC CTGATACTGC GCGAAGTGTG AACAATCTGG CATCGGTTTT GGCGCGGCAA 
GGGCGGTATT CGGAGGCACA ACCCTTGTAC GAACAGGCGT TGGCGGTGAA TGAAGCAGTT 
TTAGGTAGGG AACATCCTGA TACTGCGCGA AGTGTGAACA ATCTGGCATC GGTTTTGGAG 
AGTCAAGGGC GGTATTCGGA GGCACAACCC TTGTACGAAC AGGCGTTGGC AGTGCGCGAA 
GCGGTGTTAG GCGAGAATCA TCCGGATACG GCCATGAGTA TGAACAATCT GGCAATGGTA 
CTGTTGAATC AAGGACGGTA TTCGGAGGCG CAGGGCTTGT TAGAACGAAC CTTGACGGTG 
CATGAAGCGG TGTTGGGGGC GGAGCATCCG GACACGGCCA TGAGTGTAAA CAATCTTGCT 
GTGGTCTTGG AGAGTCAAGG GCGGTATTCG GAGGCGCAGG GCTTGTTAGA ACGAGCATTG 
GCGGTGCGGG AAGCGGTGTT GGGGGCGGAA CATCCGGATA CGGCCATGAG TGTGAACAAT 
CTTGCGGGGG TCTTGGAGAG TCAAGGGCGG TATGGGGATG CGCAGCGGTT GTATGAACGG 
GCATTGGTGG TTACGGAAGC GGTGTTGGGG GCGGAGCATC CAAATACGGC GCGAAGTATG 
AACAATCTGG CAATGGTACT GTTGAATCAA AGGCGGTATT CGGAGGCGCA GGGCTTGTTA 
GAACGGGCAT TGACGGTGCA TGAAGCGGTG TTGGGGGCGG AGCATCCGGA TACAGCCATG 
AGTGTACACA ATCTGGCGGT GGTTTTGGAG CGGCAAGAGC GGTATAGCGA TGCACAAATG 
TTATATGAAC GGGCGTTAGC CATCAATAAA GCGGTGTTAG GCCGCGAGCA TCCGGATACC 
ATGACAACAA TGGGCAGCTT GGCAGGTGTG CTTGAAAGGC AACGGCAGTA TGGGAAAGCC 
CAATCCCTCT ATGAACACGC ATTCGCCATC AGGAAACGCG TCTTGGGATT AACGCACCCA 
GATACCCAAT CCCTCCAACG GGATGTAGGA CGAGTCCAAC GCTTGCATCT GACTACCAAA 
AAGAAAAAGC GGAAATGA 

 

Protein sequence

MHLLDIQHKI SRLMARFVEE VKSSTAMGHS DINRVAETVL IPLLGRVYEC PSLQNLNSLH 
PNYPAVDLGD VARRIAFQVT TTPDSKKIKD TLTTFIAHNL HTQFDTVYVY ILTEKQHSYS 
PAIFSTITGN HLLFDPKRHI LDANDLLKQI ATYHVDKAQQ ILTILEANFD TPIDPLAHAL 
AVYGTLPLDY VPMARLDLPQ ASRIPFESSA YFVGREAELK ALARAIIQTQ PTVVVPAVTT 
GLGGIGKTSL VTEFAYRYGV YFHGGIFWLN CADANQVASQ IAACAVGLKI DTTGMALDEQ 
VQQVLYAWQS PMPRLLIFDN CEDPAILTQW KPTIGGCRVL VTARSDQWPT LTQIRLGLLS 
PVESRALLQR LCTRLTDTAA DAIAEDLGHL PLALHLAGSY LNTYSHHTVE QYRTELTIAH 
RSLKGRGAFP SPTQHELDVE ATFMVSVNQL DPNDPIDALA LGMLDGAAWC APSVPLPRYV 
ILSFVPDGTD GDDAVDALRR LQALGLLDGI ETVILHRLLA QVIHVHMGWS ATLALVEQRM 
VAAAEQAHKT GIPKQMNPLE PHLRGMTLRV LDRDTEQTAR LATNLGLFAQ HQGWYAEAQA 
LHERAFGIRR VLVGENHSST AMSINNLAEA LHQQGRYLEA QDLFERALAV REVVLGLDHP 
DTARSVNNLA LVLESQGRYS EAQDLFERAL AVREAVLGLD HPDTAVSVNN LASVLESQGR 
YSEARGLYER ALEVTEAVLG REHPDTARSV NNLASVLARQ GRYSEAQPLY EQALAVNEAV 
LGREHPDTAR SVNNLASVLE SQGRYSEAQP LYEQALAVRE AVLGENHPDT AMSMNNLAMV 
LLNQGRYSEA QGLLERTLTV HEAVLGAEHP DTAMSVNNLA VVLESQGRYS EAQGLLERAL 
AVREAVLGAE HPDTAMSVNN LAGVLESQGR YGDAQRLYER ALVVTEAVLG AEHPNTARSM 
NNLAMVLLNQ RRYSEAQGLL ERALTVHEAV LGAEHPDTAM SVHNLAVVLE RQERYSDAQM 
LYERALAINK AVLGREHPDT MTTMGSLAGV LERQRQYGKA QSLYEHAFAI RKRVLGLTHP 
DTQSLQRDVG RVQRLHLTTK KKKRK