Gene Haur_4986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4986 
Symbol 
ID5736822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp6321967 
End bp6322629 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content51% 
IMG OID641282153 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001547744 
Protein GI159901497 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.489443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGA TTGCGATAGG TGTTTTTATT GTCATCGCGC TGCTGACGCT CGGTTCGGGC 
ATTATGGTCG TGACAGTCAG AAACATCATC CACTCAGCAT TATGGCTGAT TGCCTCGTTT 
ATCGGGGTGG CAGCGCTCTA TTTGCTGATG GAAGCTGAAT TTTTAGCAGT TGTCCAGATT 
TTGGTCTATG CGGGGGCTGT TTCAATCCTC GTTTTGTTTG CTATCATGCT CACACGCCAA 
GTTACTGGTG AAGGTGTGCG CGTGGTATTT GAGCGCTGGT GGGTAGCCCT GTTGATTGCC 
TTGGGGCTAT TCGGAGTGAT TGTGCCAACA CTCTGGCAGC ATGGCTCAAC TTGGGAAGAA 
GCTTCGAAAC TGGCTCAAGT TGGCCCAGCT CCGGTTGAAG GAACTGCCGC CGCTGGCTTG 
CAAGTTGCAA CCGCTACCGA GATTGGGCGC TCGTTTATGG GCGAATACCT CTTGCCTTTT 
GAAGTTATTT CAATTTTGTT GTTGATGGCT TTGATTGGGG CGATTGTAAT TGCCTATGAA 
GAACGAACCC GCCGTCGCCG TGTGCTGACC TTGGCTGAAG AGCTTGCGTT GAAAAAACGT 
GGGATTGTCG AGCCTCGTGA TGCTGAAGGC GCAGTTGTTG CGCTAGATTC CGAACAGGCA 
TAA
 
Protein sequence
MNPIAIGVFI VIALLTLGSG IMVVTVRNII HSALWLIASF IGVAALYLLM EAEFLAVVQI 
LVYAGAVSIL VLFAIMLTRQ VTGEGVRVVF ERWWVALLIA LGLFGVIVPT LWQHGSTWEE 
ASKLAQVGPA PVEGTAAAGL QVATATEIGR SFMGEYLLPF EVISILLLMA LIGAIVIAYE 
ERTRRRRVLT LAEELALKKR GIVEPRDAEG AVVALDSEQA