Gene Haur_4943 details

Gene Information

• Locus tag: Haur_4943
• Symbol: rplM
• ID: 5736779
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 6270298
• End bp: 6270732
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641282110
• Product: 50S ribosomal protein L13
• Protein accession: YP_001547701
• Protein GI: 159901454
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACTT ATAGCCAAAA AGCTTCGGAG ATTCAGCGCG AATGGCTGGT CGTCGATGCA 
CAAAATCAGG TGCTTGGTCG GCTCGCGACC CAAATTGCAA CCCTGATTCG CGGCAAACAC 
AAGCCAACCT ATACGCCAAG CATGGATGGC GGCGATTTTG TGATCGTGGT CAACGCTGAG 
AAAATTCGCG TTACCGGCGA TAAAGCTAAC CAAAAAATTT ACTATCGACA CTCGAACTTC 
CCTGGTGGTT TGAAGCGCAC CGCTTATAAA GTGATGATGC AAACCCACCC CGAGCGGATC 
ATTTACTTCG CGGTAAAAGG CATGTTGCCA CGCAATCGCT TGAGCCGCCA TATTATCAAA 
AAACTGAAGG TGTATGCTGG TGAGAGCCAT CCTCATGCAT CACAATCACC TAAAGTCTAT 
GCGGTGAAAG GTTAA 

 

Protein sequence

MKTYSQKASE IQREWLVVDA QNQVLGRLAT QIATLIRGKH KPTYTPSMDG GDFVIVVNAE 
KIRVTGDKAN QKIYYRHSNF PGGLKRTAYK VMMQTHPERI IYFAVKGMLP RNRLSRHIIK 
KLKVYAGESH PHASQSPKVY AVKG