Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_4929 |
Symbol | |
ID | 5736765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 6261343 |
End bp | 6261882 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641282096 |
Product | ribosomal protein L6 |
Protein accession | YP_001547687 |
Protein GI | 159901440 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00377374 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGTA TCGGTCGTAA ACCGATTGAA GTTCCAGCTG GCGTAACTGT GAACGTTGAC AGTAATAATC TGGTCACGGT CAAAGGCCCC AAAGGAACCT TGAGCGAATC AATTCGGCCT GAAGTTACGG TTAATATCAA TGGCGCAACG GTAGAAATTA CCCGCGTCAA CGATAGCCGT CAGGCTCGCG CTTTTCACGG TCTCTCACGG ACGCTGGTCG CCAATATGGT CGATGGCGTA ACCAAGGGCT TTGAAAAAAC GCTCGAAATG AATGGTACAG GCTACCGCGC TACACTTGAT GGCAAAACTT TGGTGCTTTC ACTTGGCTTC TCGCACCCAG TGCGGGTTGA GCCATACGAA GGCAATAGCT TTGAAGTAGC CGAGCGTCGG GTTGTGATCA AAGGTCCCAA CAAGCAAAAA GTTGGCGACC AAGCAGCCAA TATTCGTAAG CTGCGTCCAC CCGAACCCTA CTTGGGCAAA GGCATCAAGT ACAGCGACGA AGTGATCCGC CGCAAGGCCG GTAAAGCTGG TAAGAAGTAG
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Protein sequence | MSRIGRKPIE VPAGVTVNVD SNNLVTVKGP KGTLSESIRP EVTVNINGAT VEITRVNDSR QARAFHGLSR TLVANMVDGV TKGFEKTLEM NGTGYRATLD GKTLVLSLGF SHPVRVEPYE GNSFEVAERR VVIKGPNKQK VGDQAANIRK LRPPEPYLGK GIKYSDEVIR RKAGKAGKK
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