Gene Haur_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4929 
Symbol 
ID5736765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp6261343 
End bp6261882 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content51% 
IMG OID641282096 
Productribosomal protein L6 
Protein accessionYP_001547687 
Protein GI159901440 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00377374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGTA TCGGTCGTAA ACCGATTGAA GTTCCAGCTG GCGTAACTGT GAACGTTGAC 
AGTAATAATC TGGTCACGGT CAAAGGCCCC AAAGGAACCT TGAGCGAATC AATTCGGCCT
GAAGTTACGG TTAATATCAA TGGCGCAACG GTAGAAATTA CCCGCGTCAA CGATAGCCGT
CAGGCTCGCG CTTTTCACGG TCTCTCACGG ACGCTGGTCG CCAATATGGT CGATGGCGTA
ACCAAGGGCT TTGAAAAAAC GCTCGAAATG AATGGTACAG GCTACCGCGC TACACTTGAT
GGCAAAACTT TGGTGCTTTC ACTTGGCTTC TCGCACCCAG TGCGGGTTGA GCCATACGAA
GGCAATAGCT TTGAAGTAGC CGAGCGTCGG GTTGTGATCA AAGGTCCCAA CAAGCAAAAA
GTTGGCGACC AAGCAGCCAA TATTCGTAAG CTGCGTCCAC CCGAACCCTA CTTGGGCAAA
GGCATCAAGT ACAGCGACGA AGTGATCCGC CGCAAGGCCG GTAAAGCTGG TAAGAAGTAG
 
Protein sequence
MSRIGRKPIE VPAGVTVNVD SNNLVTVKGP KGTLSESIRP EVTVNINGAT VEITRVNDSR 
QARAFHGLSR TLVANMVDGV TKGFEKTLEM NGTGYRATLD GKTLVLSLGF SHPVRVEPYE
GNSFEVAERR VVIKGPNKQK VGDQAANIRK LRPPEPYLGK GIKYSDEVIR RKAGKAGKK