| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4781 |
|---|
| Symbol | |
|---|
| ID | 5736625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 6098111 |
|---|
| End bp | 6098878 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641281946 |
|---|
| Product | putative restriction endonuclease |
|---|
| Protein accession | YP_001547540 |
|---|
| Protein GI | 159901293 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3440] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGCA ACCTTTGGCA ACGTGATGAA TTGATTCTCG CCTTCAATCT CTATTATCAA
ATCCCCTTTG GTAAGATCAA CGCTAAAAAT CCCCAAGTGC TCGCCTTAGC TCAATTAATC
GGGCGTTCGC CAGGAGCGGT ATCGTTCAAA TTATCAAATT TTGCCAGCCT TGACCCAAGC
TTAAAACAAC GTGGCATTGC GGGAGCCAGC CATGGCAGCA AAGCCGATTT AGCGATTTGG
AATGAGTTTT ATAATAATTG GGAAGCCTTA GCTATTGAAA GCGAGCAATT GCTGGCAAAG
TTGTCGCCAG CAGAGGCCGC AGAGCCTGAA ACAAACCTGA TTGAACTGCC ACTTGTTGAA
GGTTTAGAGC GTGAACAACT GCGTCGAGTG CGCGTTAATC AACACTTTTT TCGTAAAATA
GTCCTTGCTG CCTATGATCA GCGTTGCTGC ATTACTGGCT TAAATATTCC TAGTTTGTTA
AATGCCAGCC ACATTGTTCC TTGGGCACAT GCCGCCAAGC AACGAGTCAA TCCACATAAT
GGGCTATGTT TGAATGCGTT GCATGATCGG GCTTTTGATC GTGGCCTGAT CACGATTACT
CCCAATTACC AGATTCACGT TGCCTCAGCC CTCATCAAAT CCTCAGCTAA TTCAGCTACA
AACGATCTAT TATTGGCCTA CGATCAACGG CAAATTGAAC TGCCTACACG ATTTCAGCCT
GATCCAGCCT TTTTGCACTA CCACAATCAG CATATTTTCC AAGGCTAG
|
|---|
| Protein sequence | MIRNLWQRDE LILAFNLYYQ IPFGKINAKN PQVLALAQLI GRSPGAVSFK LSNFASLDPS
LKQRGIAGAS HGSKADLAIW NEFYNNWEAL AIESEQLLAK LSPAEAAEPE TNLIELPLVE
GLEREQLRRV RVNQHFFRKI VLAAYDQRCC ITGLNIPSLL NASHIVPWAH AAKQRVNPHN
GLCLNALHDR AFDRGLITIT PNYQIHVASA LIKSSANSAT NDLLLAYDQR QIELPTRFQP
DPAFLHYHNQ HIFQG
|
|---|
| |