| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4765 |
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| Symbol | |
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| ID | 5736609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 6072036 |
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| End bp | 6074591 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641281930 |
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| Product | alanine racemase |
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| Protein accession | YP_001547524 |
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| Protein GI | 159901277 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase
[COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase
[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCACG TTGCTGATTT AATCGCTGCT GGAGCGCATA TCGCCCAAGC TGGCGACCAC
ATACAATGGT CAGGCTGGGC CTATGACTCA CGCCTAGCCC AAACTGGTAA TTTGTTTATT
GCGCTCCAAA CAGCGCGGGC CGATGGCCAT GGTTTTATTC GCGATGCAAT TGCCGCTGGC
GCAACCGGAG TGGTCTGTCA ATATGCACCT AGTGTCATTC CTGCATCGAT TACCGTGATA
ATTTGTAACG ATCCTTTAAT CTTATTGCGC AGTTGGGCCA AAGCTCAGTT TGCCAAACAC
GCGCCACGCA CGGTAGCAAT TACTGGCAGC GTTGGCAAAA CCTCAACCAA ACGAGCGATT
GCCCAGGTGT TGGCAAGCCG CTACTCGGTG TTGCGTAGCC CACGTTCGTT CAATGCCGAT
TTAGGCTTAT CGGTGACCAT GGCCGAGCTT GCGGCTCAGC AATGGGCAGT TTTAGAGTTT
GGGGCTGATC ACCCAGGCGA AATTGCCCAG TTGTGCCAGC TTTTCCCCCC CGAGATTGGG
ATTGTCACCA ATGTTGGTTC GGCTCATTTG GGGGCATTTG GCTCACAAGC CGCGATTGCC
CACGAAAAAG CCGCGATTAT TCAACAGTTA CCCGCCCACG GTTACGCAAT CTTGAATGGC
GACGATCCTC TTGTGGCTGC AATGGCTGAA CGAACGCACG CTCGCCTTCT GCGGGTTGGG
CAGAATGCAG CGTGTGAGAT TCGTTGGGGC AATGTGACCA GCACCGTTCA GTCAACCCAA
TTCACTATCC ACATACCTGA ACATGCCCCT GAATGTATTC AACTCTTAGC AAGTGGCGTG
CCAAGTGTTC AGGCCGCCGC TTTTGCAATT GCCGTGGGCT ATGTTGCTGG CTTGAGTTTG
GCCGAGATGC GCGAAGCCTT GGCTGATTTG CGCCCAGCCC ATGGCCGTTT TAATCCGTTG
GTTGGGCGTA ATGGCGCGAC GATTATTGAT GATACCTTTA ATGCTGCGCC CGAATCGGTG
TATGCAGCCC TGCAAACGCT TGGTTCGTTG CCCGCCCGCC GCCGGATTGC GATCCTCGGC
GATATGGCTG AATTAGGCGC TGCTAGTGCT CGCTTTCATC AACAAGCGGG CCAAATTGCT
GCCCAACATG CCGATTTACT GATTACTAAA GGCGACCAAG CAGCGCTTGC TGCTACCAGT
GCCCGTGAAG CAAGCGCAAC TTACGGTTAT CAAATTAACA CCATGAGCGT GCATAGTGCG
GCGGCGGTGT TGGCGGCTGT CCCAACCGAT CTTGGTGCAG GCGATTTGGT GTTGGTCAAG
GGGGCGGCTG AATCGCGAAT GGAACATGTC GTCGCAGGCT TGTTGGCTCC TGAAGCTGAT
CCACGGCAGG TGTTGGTGCG CCAAGAGCAT GTTTGGCGCA CTGTACGCAT TGGCCTGCCC
GATCGGCCCA CAACGGTGCG AATTGATCTT GATGCTTTGG CGAGCAATGT GCAAGCTATT
CGGCAGGCCG TCGGCGTACC TGTAATGGCA GTGCTCAAAG CCGATGCCTA TGGCCATGGT
GCAGTTCGTT CAGCTCGCAC CGTTTTATTA AATGGGGCAA GCTCGTTGGC GGTAGCAACT
TTAGGCGAAG CCCTGCACTT GCGCCAAGCT GATATTGCCG CGCCAATCTT GATTTTGGGC
TATACCCCAA CCTGGCAAAT GCGCGAAGCA TTGCTCAATC GGATCAGCGT AGCATTATTT
GATCGCCATG TCGCTCAATC GTTGCATGAA CAGGCCTTGG CTTTGGGATT GAAAGCCCAA
GTACACATCA AAATTGATAC AGGCATGGCA CGATTGGGCT TGGCAGTTGA GCAAGCGGTG
GATTTTATCG AATGGTTGCA AGGCTTGGCG GGCATCGAAG TTGTCGGCAT TTTCACCCAT
TTTGCCAACG CCGATGAGGC TGATGCAAGC TTTTTTGGCT TGCAACTGCA ACGTTTTCAA
ACGCTGCTTG ATCAATTAAC CCAGCGTGGA TTACGACCGC CAGTGGTGCA TGCCGCTAAT
AGTGCTGCGG CCATGGTGCA TCCAAGTGCT CGCTATGATA TGGTGAGAGC GGGGATTGCC
TTGTATGGCA TCGACCCAAG CAGCGATGTA CATTTGAATC TCCAGCCAGT TTTGGAATTC
CAGACTGAGG TAGCTCAAGT GCGTGAGTTG CCAGCAGGCA GCCCAATTTC ATATGGCTGT
ACCTTTGTCA CCAGCCGCAT CTCGCGGATT GCCACAATTC CGGTGGGCTA TGCCGATGGA
TTTCGGCGTG CGCCCCAGCC TTGGCGCGAA GTGCTGATTC ATGGTCAGCG CGTGCCAGTC
GTCGGGCGGG TGTGTATGGA TTATGCCATG ATCGATGTAA CTGAGCTTGA TTCTGTGCAA
CGCGGCGATC AGGTGGTACT GATCGGGCAA CAGGGCACAG ATCGAATTCG CGCTGAGGAA
GTGGCTGAGT GGTTGGGCAC GAATGCCTAT GAAGTGGTTT CGGCAATCTT GCCACGCGTG
CCCCGTGAGC CAGTCGAGCA TTTTGCCGAG CGCTAA
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| Protein sequence | MIHVADLIAA GAHIAQAGDH IQWSGWAYDS RLAQTGNLFI ALQTARADGH GFIRDAIAAG
ATGVVCQYAP SVIPASITVI ICNDPLILLR SWAKAQFAKH APRTVAITGS VGKTSTKRAI
AQVLASRYSV LRSPRSFNAD LGLSVTMAEL AAQQWAVLEF GADHPGEIAQ LCQLFPPEIG
IVTNVGSAHL GAFGSQAAIA HEKAAIIQQL PAHGYAILNG DDPLVAAMAE RTHARLLRVG
QNAACEIRWG NVTSTVQSTQ FTIHIPEHAP ECIQLLASGV PSVQAAAFAI AVGYVAGLSL
AEMREALADL RPAHGRFNPL VGRNGATIID DTFNAAPESV YAALQTLGSL PARRRIAILG
DMAELGAASA RFHQQAGQIA AQHADLLITK GDQAALAATS AREASATYGY QINTMSVHSA
AAVLAAVPTD LGAGDLVLVK GAAESRMEHV VAGLLAPEAD PRQVLVRQEH VWRTVRIGLP
DRPTTVRIDL DALASNVQAI RQAVGVPVMA VLKADAYGHG AVRSARTVLL NGASSLAVAT
LGEALHLRQA DIAAPILILG YTPTWQMREA LLNRISVALF DRHVAQSLHE QALALGLKAQ
VHIKIDTGMA RLGLAVEQAV DFIEWLQGLA GIEVVGIFTH FANADEADAS FFGLQLQRFQ
TLLDQLTQRG LRPPVVHAAN SAAAMVHPSA RYDMVRAGIA LYGIDPSSDV HLNLQPVLEF
QTEVAQVREL PAGSPISYGC TFVTSRISRI ATIPVGYADG FRRAPQPWRE VLIHGQRVPV
VGRVCMDYAM IDVTELDSVQ RGDQVVLIGQ QGTDRIRAEE VAEWLGTNAY EVVSAILPRV
PREPVEHFAE R
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