| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4683 |
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| Symbol | |
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| ID | 5736530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5981095 |
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| End bp | 5982789 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641281847 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001547442 |
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| Protein GI | 159901195 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCGAC GTATTCGTTG GCAAATTGGA GCCACGTTGG TTTGTGCTAG TCTGGTTTTG
TTGTTGTTGG CGCATCTTGC GCTAGCAACA ACAGCAGGCG GCGAGGCAGG CGTTGGCGGG
GTCTATCGCG AGGCCTTGGT TGGCGAGGTC AATGATCTTA ACCCATTGCG CGGTAGTGCC
CAAACCCGCG CCGAGGCCGA CTTAAGTGCT TTGTTGTTTG AAGGCTTGAC CCGCGTTGAG
GCAACTGGCG TGGTCGTGCC CGATCTCGCC GAAAATTGGC AGGTCAGCAG CAATAATCTG
GTTTATACCA TGACCTTGCG CACTGATGTG CGCTGGCACG ATGCCACACC TTTTTCTGCA
AACGATGTGA TCTGGACGAT CGACTGGATC AAAAGCCCAC AATTTAATGG CGACCCCAGC
CTTAAGTTAG CTTGGCAAAA TATCGCCGTC ACCGCGTTGA ATCCGCAAAC TGTGCGTTTT
AACTTGCCAG TTGCTTTTGC GCCCTTCCTC AACCAACTAA CTGTGCCAAT TTTGCCCGCG
CATCTGTTGC GCAACGCTAC GCCCGACCAA TGGCAAGCTT GGAATCAGCA ACCAGTTGGC
ACTGGCAGTT TTCGCTTTGG TAAACGCGAT GGCAACTTAA TCGAGCTATT GGCCAACACT
GATTACCGTC CGAATATTCC CAATAGTCGC CCCAATTTGG AGCGGCTGGA GTTTCGGCTT
TACGCAACCA TGGAAGCTGC GCATGAAGCA CTGCGCCGTG ATTTGGTCGA TGCGTTTGCC
TACGATGTGA CTGAACAAGG CGAATTACCG TTGCCAATCG GCTATCGCCA GGTGCGTGCG
CCTTTGGCTG ATTATGTGGT CCTGACGATT AATTTGCGTC GTCCGCCACT TGATGATTTA
CGGGTGCGCC AAGCGATCGA TTATGCAGTT GACCCAACTA CGTTGATTAC TGAAGTGTTG
CAAAATCGGG CGTTGCCCTT GAATTCGCCA ATTTTGCCTT CGTCGTGGGC GGTTGCTGAG
GGTCTCACCG GCTATATTGA TGATGCTGAG CAGAGTCGCG CCAATGGGTT GCTTGATCAA
GCTGGTTGGC AGCGTGATGC CGAAGGGTGG CGGCGTAAAG CTGGCCAATT GTTGCGCTTC
GATTTGGTCA GTGCCAACAG CCCCGAACGC AGCGCCATCG CCGAACGCAT TCAAGCCCAA
TTAGCCACGG TCGGTATTTC AAGCAGTTTG CAATTGGTTC CGAGCAGCAA TTTGCAAGAT
ACGCTGAGCC AACATACCTT CGATTTAGCA ATTCATGGTT GGTCGAATTT AGGCAGCGAC
CCCGATGTTT ACGAGTTATG GCATTCGTCG CAGGTCAACG CCGCCAACTT TGCTGGCCTC
GAAGACCCAG CAATTGATGA TTTATTGGTG CGTGCTCGCC AAACCACCAG CCAAGAAACC
CGCCGCGAAT TGTATGCTGA ATTTCAGGCC AAATGGCTAG CACTCGCGCC CTCAGTGATG
CTCTATCAGC CGTTGTTGGA GCAGCAGGTT GGACCATCGA TCGAGGTGCT TGGTCTGGCT
CCAATCAACC AACAAGCTGA AGTGCTCTAT CGGCATAGCG ATCGCTTCCG GCGGATCGCC
AATTGGTATC TAGTATCCAC CCGTCAAGTC TTGCCCAACT TCCGAAATGA ACCACAAAAC
GAACGCCCAC GCTAA
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| Protein sequence | MVRRIRWQIG ATLVCASLVL LLLAHLALAT TAGGEAGVGG VYREALVGEV NDLNPLRGSA
QTRAEADLSA LLFEGLTRVE ATGVVVPDLA ENWQVSSNNL VYTMTLRTDV RWHDATPFSA
NDVIWTIDWI KSPQFNGDPS LKLAWQNIAV TALNPQTVRF NLPVAFAPFL NQLTVPILPA
HLLRNATPDQ WQAWNQQPVG TGSFRFGKRD GNLIELLANT DYRPNIPNSR PNLERLEFRL
YATMEAAHEA LRRDLVDAFA YDVTEQGELP LPIGYRQVRA PLADYVVLTI NLRRPPLDDL
RVRQAIDYAV DPTTLITEVL QNRALPLNSP ILPSSWAVAE GLTGYIDDAE QSRANGLLDQ
AGWQRDAEGW RRKAGQLLRF DLVSANSPER SAIAERIQAQ LATVGISSSL QLVPSSNLQD
TLSQHTFDLA IHGWSNLGSD PDVYELWHSS QVNAANFAGL EDPAIDDLLV RARQTTSQET
RRELYAEFQA KWLALAPSVM LYQPLLEQQV GPSIEVLGLA PINQQAEVLY RHSDRFRRIA
NWYLVSTRQV LPNFRNEPQN ERPR
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