Gene Haur_4575 details

Gene Information

• Locus tag: Haur_4575
• ID: 5736420
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: -
• Start bp: 5854575
• End bp: 5856398
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641281737
• Product: GTP-binding protein TypA
• Protein accession: YP_001547334
• Protein GI: 159901087
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0154436
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACGAA CTGATTTACG CAATATCGCA ATTATTGCCC ACGTTGACCA CGGCAAGACG 
ACCTTGGTTG ATGCCATGTT GAAGCAAAGT CGGATTTTCC GTGATAACCA ACAAGTCGCT 
GAACGGGTGA TGGACTCCAA CGCCATCGAA CGCGAACGTG GGATCACGAT TATGGCCAAA 
AATACCGCTG TTGAATATAA CGGCGTGCGG ATTAATATTG TCGATACGCC AGGCCACGCC 
GATTTCGGTG GCGAGGTTGA GCGGGTTTTG AACATGGTCG ATGGCGTGTT GCTGTTGGTC 
GATGCGGTTG AAGGCCCAAT GCCCCAAACC AAGTTCGTGC TGCGCAAAGC TCTCGAACAA 
GGCCACCGCG CGATTGTCGT CGTCAACAAA GTCGATCGCC CGAGCGCTCG CCCCAATTAT 
GTGGTCAACG AAACCTTCGA TTTATTCATC GACTTGGGCG CAACCGAAGA ACAAGCTGAA 
TTCCCAATTG TTTATGCCAG CGGGATTGCT GGCACAGCTG GCCACGACCC TCACGCGATG 
CAAGATTCGC TGACCCCACT GTTTGAAACG ATTTTGCAAT ATGTGCCCGC CCCCGATGTT 
GATGCCCATG GCCCGCCGCA ATTGCTGGTC ACTTCAACCA TGTACGACGA TTACAAAGGC 
AAAATCATCA TTGGCCGTTT GAACAGCGGA ACCATTCGTA AAGGTCAAGC GGTTGCTCAC 
ATCGCCGCAG GCAAAGATCC CAAGCCTGCC AAAGTGGTGC AAGTGTTCAC CCACTATGGC 
ATGGAACGGG TCGAAGTCGA TGAAATCACT GCTGGCGATA TCGTCGCCAT GACTGGGATC 
AACGACGCTG GGATTGGCGA TACGATTGCC GATAAAGATA ATCCAGTCGC CTTGCCACCA 
ATCAAGGTCG AAGAACCAAC CGTTCAGATG ACCTTCGGCG TGAATACCAG CCCCTTCAGC 
GGTCGCGAAG GCAAATTGGT AACCTCACGC AAAATTCGCG AACGCTTATA TGGCGAAACC 
GAGCGCGACG TGGCCTTGAA GGTCGAAGAT ACCGACAACG CCGATACCTT CCGCGTCAGC 
GGTCGCGGTG AGTTGCACTT GGCAATTTTG ATCGAAAATA TGCGGCGCGA AGGCTATGAG 
TTCCAAGTCT CTAAAGCCGA AGTGATTTAT AAAGATATTG ATGGCACACG CCACGAGCCA 
TATGAATTGG TCGAAATCGA AGTTGATTCC GATTATCAAG GCTCGGTCGT CGAATTGATG 
GGCTTGCGCC GTGGCACCAT GCGCGACATG AGTGTTAGCG ATTCAGGTTC GGTGCAATTC 
GTCTATCACG TGCCAACCCG TGGTTTGTTG GGCTTCCGTC AACAATTGCT CACCGCAACT 
CGGGGCACAG GCATTATGAA CAGCTTGTTT GCTGGCTATC AACCTTACGC TGGCGATGTG 
CAAACACGCC AATTTGGCTC GTTGATTGCT TGGGAACAAG GCGTAACCAG CAGCTATGGC 
TTGTCGAGCG CCCAAGAACG CGGCCAATTA TTTGTTGGCT CAGGCGTTGA TGTGTACGAA 
GGCATGATCA TTGGCCAACA CATTCGTGAC GAAGACCTTG AAGTCAATGC CTGTAAGAAA 
AAGCAACTGA CCAATATGCG TTCATCAGGT GCTGACGATG CCTTGCGCCT CGACGTACCA 
CGCAACATGT CGCTCGACGA TTGTATCGAA TACCTTGCCG ACGATGAATT GCTCGAAGTA 
ACTCCGCTGC ATTTCCGGCT CCGCAAGCGT ATCCTCAACA CCGACGAACG CCGCCGCGAT 
CGCAAATGGG CCAAAAATCG CTAA 

 

Protein sequence

MQRTDLRNIA IIAHVDHGKT TLVDAMLKQS RIFRDNQQVA ERVMDSNAIE RERGITIMAK 
NTAVEYNGVR INIVDTPGHA DFGGEVERVL NMVDGVLLLV DAVEGPMPQT KFVLRKALEQ 
GHRAIVVVNK VDRPSARPNY VVNETFDLFI DLGATEEQAE FPIVYASGIA GTAGHDPHAM 
QDSLTPLFET ILQYVPAPDV DAHGPPQLLV TSTMYDDYKG KIIIGRLNSG TIRKGQAVAH 
IAAGKDPKPA KVVQVFTHYG MERVEVDEIT AGDIVAMTGI NDAGIGDTIA DKDNPVALPP 
IKVEEPTVQM TFGVNTSPFS GREGKLVTSR KIRERLYGET ERDVALKVED TDNADTFRVS 
GRGELHLAIL IENMRREGYE FQVSKAEVIY KDIDGTRHEP YELVEIEVDS DYQGSVVELM 
GLRRGTMRDM SVSDSGSVQF VYHVPTRGLL GFRQQLLTAT RGTGIMNSLF AGYQPYAGDV 
QTRQFGSLIA WEQGVTSSYG LSSAQERGQL FVGSGVDVYE GMIIGQHIRD EDLEVNACKK 
KQLTNMRSSG ADDALRLDVP RNMSLDDCIE YLADDELLEV TPLHFRLRKR ILNTDERRRD 
RKWAKNR