| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4475 |
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| Symbol | |
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| ID | 5736326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5721417 |
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| End bp | 5723672 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641281638 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001547235 |
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| Protein GI | 159900988 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCG CACCTCATAT GCCTAGTTCT TTTAATGATG ATGCAACCCA TAGCGAGAGC
ACAAAATACA TCACTGCGAC TCCCGCTAGT TCGCCGCTAG TTCATGAAAG TGAAGCGCTG
ATCAGCCGCA TGCGTACCTA TTGGCCGCTT GATGAATTTC AATTAATCGA GCGAGCTTGG
GATGTAGCCA AGGTCGCCCA TGCTCCCCAA ATTCGTAAAT CGGGGGAGCC TTATTTTCTG
CATCCAGTGC AAGTGGCCCA TATTTTAGTC GATATGAAGC TCGACCCCGA ATCGGTCGCG
GCGGCGCTAT TGCACGATGT GGTTGAAGAT ACGCCGATTA CTTTGGAGCA AATTCGTGCC
GATTTTGGCC GCGAAGTCGC CCATATCGTC GATGGCGTGA CCAAATTAAG TAAGTTGGAA
GCCAAAAGCA TCGAAGAAGC CCAAGCGATT ACCTATCGCA AGATGTTTAT TGCGATGGCC
GATGACCCGC GCGTGGTGCT GATCAAGCTG GCCGACCGCT TGCATAATAT GCGCACGCTT
GGCGCAATGC GCCCCGATAA ACAGCAACGC ATCGCCCGCG AAACCCTCGA AGTTTATGCA
CCACTCGCCC ATCGCCTCGG GATTTGGCAA TTCAAGTGGG AGCTAGAAGA CCTTTCGTTT
CGCTATATCA ACCCCGAAAA GTATAGCGAA ATTGGTCGTC AGCTCAACTT GCGCCGCGAA
ACCCGTGAGC GGATCGTGCA ACGGGTCATT GCCCGCCTCA AACAGATTCT CGACCGCGAT
AATATTAAAG CTGAAGTAAC AGGCCGCCCG AAACATATCT ATTCAATCGC CCGCAAAATG
GAGCGCAAGA GTGTAAGCCT TGATCAAATT TATGATCAAT TGGCAGTACG GGTTATGGTC
AATAGCGTTG ATGAATGTTA TCGTGTGCTG GGTTTGGTGC ACTCAACTTG GATTCCAATT
ATGAGCGAAT TCGACGATTA TATTGCTGTC CCCAAGGAAA GCATGTATCG TTCGCTGCAT
ACAACTGTGG TGATTCCAGG TGAGCAACCC TGCGAAGTTC AAATTCGCAC CTACGAAATG
CACGAAGTTT CTGAATATGG GATTGCCGCA CACTGGCGCT ATAAAGAAGG CTTTGGCAAC
AAACACGATC AATCGTTTGA AACCAAATTA GCGTGGCTAC GCTCAGCAAT CAACGGCCAG
CGCGACCTTG ATCCGACCGA GTTTTTCGAG ACGGTCAAGG AAGATGTGCT GCGCGATCAG
GTGTTTGTGC TCACTCCCAA GGGCAAAATC ATTGATCTGC CCAAAGGCTC GACCCCGATC
GATTTTGCCT ATCGCATTCA CTCAGAGGTT GGCAATCGCT GTATTGGGGC GCGGGTCAAC
AACAAACCAG TGCCGTTGTA TTATCAACTA CAACATGGCG AAATTGTCGA TGTCGTAACC
AGCAAAGTGC CGCGCGGCCC TTCGCGCGAC TGGCTGGAAT ATGTTAAATC GAACGGCGCA
CGCACCCATA TCAAACGCTG GTTCCGTCGC CAAGAGAACG ATGTTAATAT TTCAGCGGGC
CGCGAATTAA TTGATAAAGA ACTTAAACGT TTGGGTGTAC GCCCAACCAT GGAAGAGTTG
ATTCGCGCCA ATGCCATGAA AAATAGCGAG GATTTTCTGG CAGCGATTGG CAATGGAGAT
CTTTCGCCGC GCCAAGCAAT TCAGCGTGTC ATCAGCGATA AAGGTGCTGA GGAAGAGCCA
TTGGCGGCAA TTCCTACGAT TGCACCGCCT TCCAAGCCAG TCAAACCAGG CACAATTATC
GTGCGCGGCG AGACCGATGT CTATACTCGC ATCGCCCACT GCTGTAATCC GGTTTATCCT
GAGGCAGTGA TTGGCTATAC CACTCGTGGC CATGGCATCA CTGTTCACCG CATGGATTGC
CATAACGTTT TGCATGAACG CAATCGCGAA CGTTTGATCG ATGTTGATTG GGGTGGGACA
ACCGAAAAAC AATCCTATCC TGTACCAATT CGGATCGAAG CATGGGATCG GGTCGGGCTT
TGGCGTGATG TGACCAATGC AATCGCTGAT GGCAATATCA ACATTCAAGC GGTGCAGCAA
TTGGACAATA AACATCATGG CCGCGCCACC TTGCTTGCGA CCATCCGCAT CGAGAGCATC
GATCAACTTA GTCGCATTTT GGATAAACTC AATCGCGTCA AGGATGTCAT CGAGGCTCGC
CGCGAAAATA CGGTCGCTGG CACGATGATT GGCTAG
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| Protein sequence | MDLAPHMPSS FNDDATHSES TKYITATPAS SPLVHESEAL ISRMRTYWPL DEFQLIERAW
DVAKVAHAPQ IRKSGEPYFL HPVQVAHILV DMKLDPESVA AALLHDVVED TPITLEQIRA
DFGREVAHIV DGVTKLSKLE AKSIEEAQAI TYRKMFIAMA DDPRVVLIKL ADRLHNMRTL
GAMRPDKQQR IARETLEVYA PLAHRLGIWQ FKWELEDLSF RYINPEKYSE IGRQLNLRRE
TRERIVQRVI ARLKQILDRD NIKAEVTGRP KHIYSIARKM ERKSVSLDQI YDQLAVRVMV
NSVDECYRVL GLVHSTWIPI MSEFDDYIAV PKESMYRSLH TTVVIPGEQP CEVQIRTYEM
HEVSEYGIAA HWRYKEGFGN KHDQSFETKL AWLRSAINGQ RDLDPTEFFE TVKEDVLRDQ
VFVLTPKGKI IDLPKGSTPI DFAYRIHSEV GNRCIGARVN NKPVPLYYQL QHGEIVDVVT
SKVPRGPSRD WLEYVKSNGA RTHIKRWFRR QENDVNISAG RELIDKELKR LGVRPTMEEL
IRANAMKNSE DFLAAIGNGD LSPRQAIQRV ISDKGAEEEP LAAIPTIAPP SKPVKPGTII
VRGETDVYTR IAHCCNPVYP EAVIGYTTRG HGITVHRMDC HNVLHERNRE RLIDVDWGGT
TEKQSYPVPI RIEAWDRVGL WRDVTNAIAD GNINIQAVQQ LDNKHHGRAT LLATIRIESI
DQLSRILDKL NRVKDVIEAR RENTVAGTMI G
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