Gene Haur_4436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4436 
Symbol 
ID5736287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5676607 
End bp5677767 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content49% 
IMG OID641281599 
Producthypothetical protein 
Protein accessionYP_001547196 
Protein GI159900949 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCGC AAACGCAAGC AAATCCTGCT AGTTTACGCC CTGAGCAAAC CAACCAAGGC 
TTGCCGCGTC CGGCTGAAAC CGAATCGCTC GAACAATTGG TTGAACAGGC CGCCGAAGCT
GCACCGTTAC CTGCCGATGC ACTGCCCGAC GATTTAGCCG AGGTGCGTTC GAGCGGCTTT
TCGCTACGTG ATAAATTTCT GAATGTTAAA TCCTTGGCAT CGTTTGGCAT TGCTTTTGCG
ATTCTGGGCT TAGCATTTTG GCGAGCCGAT ATTAACCTCG CTGAGATGTG GCAGCAGATT
CTTCAGACCA ATCTTTGGCT GTATAGCGCT GGTTTTATTG TTTTCTATGG TCTTTTTCCA
ATTCGCGCCT GGCGCTGGCG GATTATCTTG CGTAGCGCTG GCTTTGAGGT TGATAGCCCG
CAATCACGTA AAAATTGGTC GGGGATTGCG GCATTAAGCG AGTTTATTGG GCTTTCGTGG
TTTGCCAACT GCGTCGTGCC TGCCAAACTG GGCGATGCCT ATCGGGGTTA TTTGGTTAAG
AAAAACGGCA ACGCCTCATT CTCGCGCACC TTGGGTACAA TTTTCGCCGA ACGCATTGTC
GATATGATTG TGCTGTTTGG CATGTTGGTA GTTTCGGGCT TATTGGTCTT TCAAGGCCAT
CTCAATAGCT GGACCGAAAA ATTATTTATC ATCGGGATTG TCTTTACAAT TTTGCTGGTG
ATTGGTTTGA TGTCGATGCG CTATCTGAGT CCGTTGATTC GCCGCGCCTT GCCCCAACGT
TTCCACGATT TTTATGCTCG CTTCGAGGAA GGCACGCTTT CATCATTTCG ACCTTCACGC
CTGCCAATTT TGCTGATTTT GACAATCATT GTTTGGCTGG GCGAGTCGAT GCGCTTGTTT
TTCGTAATTG AGGCCATGGG TGGTTTAGGC TTATCGTTAT CAGCGATTAT TTTTGTGGCC
TTAGCTAGCT CATTGTTGAC CGCCGTGCCA GCCTTGCCTG GTGGCTTGGG CTTGGTCGAG
GTCGGGATTG CTGGTGTGAT GATGTTGTTT AGTGTCGGCC AAACCACTAG CACTGCCGTG
GCGTTTCTTG ATCGGATCAT CAATTATTGG AGCATCGTGA TTTTGGGGTT GGTTTTGTAT
CTGTTTAGCA AACGAAAGTG A
 
Protein sequence
MKSQTQANPA SLRPEQTNQG LPRPAETESL EQLVEQAAEA APLPADALPD DLAEVRSSGF 
SLRDKFLNVK SLASFGIAFA ILGLAFWRAD INLAEMWQQI LQTNLWLYSA GFIVFYGLFP
IRAWRWRIIL RSAGFEVDSP QSRKNWSGIA ALSEFIGLSW FANCVVPAKL GDAYRGYLVK
KNGNASFSRT LGTIFAERIV DMIVLFGMLV VSGLLVFQGH LNSWTEKLFI IGIVFTILLV
IGLMSMRYLS PLIRRALPQR FHDFYARFEE GTLSSFRPSR LPILLILTII VWLGESMRLF
FVIEAMGGLG LSLSAIIFVA LASSLLTAVP ALPGGLGLVE VGIAGVMMLF SVGQTTSTAV
AFLDRIINYW SIVILGLVLY LFSKRK