| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4422 |
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| Symbol | |
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| ID | 5736273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5658405 |
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| End bp | 5659883 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641281585 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001547182 |
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| Protein GI | 159900935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCTT ATTGGATTAA TTTGGTATTT GTGATGCTTG AAACGGCTTT GGGCACGTTT
ATTTTGGCCC GATCTAGCCA TTATCGCCCA GCCCGAATCT TTTTTGGGTT AACCCTATGC
TTGATAGTCA TTAATAGCAC GGCGCTTGCC CGTAATCTAA CAACTGATCA TGCTACCTCG
TATGGGTTGG TTGGGATTGC CCTGGTGAGC CTGGGGTTGC TTTGTTGGTT GATGTTGCTT
TTGTTTGCAG CGTTGTTTAT GCCACAATGG TGGGAAGGCT CACGCCCAAT TCGCTCGATT
TCATTGGTTT ATGGCCTATC GATTGGCTTA TTAGCACTTG ATTTGATTGG GCAATTTGGC
TGGTTTACCA CTGGGATCGA ATTAGCCAAT GGCAGCTATC GGCCTATCGC TGGGCCAGCG
GCGGGTTTGA TGTTGGCTTT ATTTAGCCTT GGGTGGTTGG TGCAGCTTGG ATTGTTAGGC
ATGGCATTTT GGAGACAACC AGCAACCCGC CGCTCCATTA GTTGGTTGGC TTTTGCAATT
CTCTTTTCAG CATTGACCAA CTCGGTATTG GGGATTGTCA AGCTTGAGCC AAGTGGCCAG
TTGGCAAGTG TGCTACAAAC GTTGCCCTTG GTTTTAAGTT TGACCTACAT TGTTTTGCGT
GGCAGTTTGT TTCAGACCAA ACAAGTAGCG GTGCAGCAGG CTTTGCAAAC CATGAGCGAA
GCGATGGTGG TCGTTGATCG CGAAGGAATG ATTGTTTATC TCAATAATGC GGCCCACCAG
CTTGGTTTGC AAACTCAGCA ACCACTTCAA CAGGCATTTC AAACGATTGG AGTTGCAGTT
GATGATGTTG CGGCTTTGGC TAAAGCATTA GCGCAGCCGC AAATCCAAGC TTTTACTCAA
ACGCTGGCCT TGGGCAACCC TTTGCGCTTG CTAGAAAATG CAGTATCACC AATTTTGGAT
AGCGCTGGAC AGAGCCAAGG TACGATGTTG TTCATTCGGG ATATTACCGA GTTGGAGCGG
CACACGGCTT TGTTGGAGCA GGAACGGCGG CGCTTGAGCG TAATGGTAGA ACAACTTGAG
CAGGAACAAA TCCAACGTAA TCAATTGACT CAAGCAGTTC AGGCGCTCTC ATTTCCAACG
ATTCCGGTTT TGCCGGGCGT GCTGGTTCTA CCCCTGATCG GGGTACTTGA TCAGCAGCGA
ATTATTGAAT GTCAACGGGT TTTGATGGAA TCATTGAATC AGCAGCCAGT TCAACGTTTG
CTGATAGATT TGACCGGAGT TCAATTGATC GATGCTGAAG GTGCAATTGG CATGCAGCGA
ATGTTGCGGG CCGCCTATTT GCTTGGTGCT CAAACAACAT TAATCGGGGT ACGACCTGAG
GTCGCTCAAG CCTTGGTTGG AATGGGCGCT GATTTGCAGC ATGTCGCGAC CGCCGCAACC
CTGCAAGCTG CGGTCGGCCA AATTATCGCC AAAGGCTAG
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| Protein sequence | MLAYWINLVF VMLETALGTF ILARSSHYRP ARIFFGLTLC LIVINSTALA RNLTTDHATS
YGLVGIALVS LGLLCWLMLL LFAALFMPQW WEGSRPIRSI SLVYGLSIGL LALDLIGQFG
WFTTGIELAN GSYRPIAGPA AGLMLALFSL GWLVQLGLLG MAFWRQPATR RSISWLAFAI
LFSALTNSVL GIVKLEPSGQ LASVLQTLPL VLSLTYIVLR GSLFQTKQVA VQQALQTMSE
AMVVVDREGM IVYLNNAAHQ LGLQTQQPLQ QAFQTIGVAV DDVAALAKAL AQPQIQAFTQ
TLALGNPLRL LENAVSPILD SAGQSQGTML FIRDITELER HTALLEQERR RLSVMVEQLE
QEQIQRNQLT QAVQALSFPT IPVLPGVLVL PLIGVLDQQR IIECQRVLME SLNQQPVQRL
LIDLTGVQLI DAEGAIGMQR MLRAAYLLGA QTTLIGVRPE VAQALVGMGA DLQHVATAAT
LQAAVGQIIA KG
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