Gene Haur_4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4411 
Symbol 
ID5736262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5634257 
End bp5634922 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID641281574 
Productputative transaldolase 
Protein accessionYP_001547171 
Protein GI159900924 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCT TTTTGGATAC TGCTGATGTC GAAGAGATTC GCCAAGGGGT GGCGATGGGT 
GTGGTTGATG GTGTGACCAC CAACCCTTCA TTAGCAGCAA AAGCAGGCCG CAACTTCCGT 
GATGTGGTTT TAGAGATTGT TGAAATTTGT CCCGGCCCAG TCAGTGCCGA AACCGTGGCA 
TTGCAAGCCG ATGAAATAGT CCGCGAAGGC CGAATTTTGG CCAAATGGGC ACCAAACATT 
GTGGTCAAAG TGCCGTTGAT GGCTGAAGGC TTGAAAGCTG TTAAGCAATT GACCAGCGAA 
GGCATCAAAA CTAATGTAAC CTTGATTTTC TCAGCTTCCC AAGCCTTGTT GGCCGCCAAA 
GCTGGGGCCA CCTTCGTTAG TCCGTTCTTG GGGCGGCTCG ATGATATCGG CCAAGATGGC 
ATGATCTTGA TTCGCGATAT TGTCCAGATT TTCAAAAACT ACAATATCCA AACCGAAGTC 
TTGGCGGCCT CAATTCGCCA CCCAGTTCAC GTTTTGCAAT CGGCATTGGC TGGCTCGCAT 
GTTGCTACCA TGCCATTCAA AGTGCTACAA CAACTGGTCA AGCACCCGTT AACTGACAAA 
GGCATCGAAA CCTTCTTAGT CGATTGGCAA CAAGTGCCCG ATGCCGCAAC CGTGTTTGCT 
GAGTAA
 
Protein sequence
MKIFLDTADV EEIRQGVAMG VVDGVTTNPS LAAKAGRNFR DVVLEIVEIC PGPVSAETVA 
LQADEIVREG RILAKWAPNI VVKVPLMAEG LKAVKQLTSE GIKTNVTLIF SASQALLAAK 
AGATFVSPFL GRLDDIGQDG MILIRDIVQI FKNYNIQTEV LAASIRHPVH VLQSALAGSH 
VATMPFKVLQ QLVKHPLTDK GIETFLVDWQ QVPDAATVFA E