| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4387 |
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| Symbol | |
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| ID | 5736237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 5603479 |
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| End bp | 5604246 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641281549 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001547147 |
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| Protein GI | 159900900 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00629853 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAC AAAGTTTGAG TGTAGTGGTA ACTGGTGGAG CTTCTGGTTT GGGCGGGGCA
ACCGTGCGAC GCTTGTATAG CGCTGGAGCC AAGGTCGTAA TTGCCGATCG TAACATTGAG
GTTGGTGAGG CGCTTGCCAA GGAATTAGGC TCAAATGCCC AATTTGTGGC TTGTGATGTA
ACCGATGAAA CATCGCTGGC CGCCGCATTT GATCAAGCGA TTGCCACCAA TGGGCGTTTG
CAAGCGGTGA TTAGCTGTGC CGGTGTTGGC AGCGCCGAGA AAATTCTGGG CCGCAATGGC
GTGCATAGCC TTGAACTTTT CAATCGGGTA ATCCAGGTTA ACTTAAATGG GGTGTTTAAT
GCCTTGCGCT TGGGTGCTGA ACGCATGAGC CAAAATGAGC CAAATGCGGC TGGCGAACGC
GGGGTCATTA TTAACACTGC CTCGATTGCC GCCTTCGATG GCCAAATTGG TCAAGTCGCC
TATAGCGCCT CGAAAGGTGC AATTGTTGGG CTAACCCTGC CTGCTGCCCG CGAATTGGCG
CGGCATGGCA TTCGGGTGAT GACGATTGCG CCAGGTACAT TTGATACGCC GTTGTTGGCA
GGTTTGCCCG AACCAGCCCG CCAAACCTTG GCCGCGCAAG TGCCCTTCCC GCCACGCTTG
GGCGATCCGG CGGAGTTTGC CATGCTGGCC CAGCATATTC TCGAAAACCC GATGTTAAAT
GGTGAGACCA TTCGCTTGGA TGGCGCATTA CGCATGGGCT ATAAGTAA
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| Protein sequence | MEIQSLSVVV TGGASGLGGA TVRRLYSAGA KVVIADRNIE VGEALAKELG SNAQFVACDV
TDETSLAAAF DQAIATNGRL QAVISCAGVG SAEKILGRNG VHSLELFNRV IQVNLNGVFN
ALRLGAERMS QNEPNAAGER GVIINTASIA AFDGQIGQVA YSASKGAIVG LTLPAARELA
RHGIRVMTIA PGTFDTPLLA GLPEPARQTL AAQVPFPPRL GDPAEFAMLA QHILENPMLN
GETIRLDGAL RMGYK
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