Gene Haur_4353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4353 
Symbol 
ID5736213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp5561680 
End bp5562702 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID641281514 
Producthypothetical protein 
Protein accessionYP_001547113 
Protein GI159900866 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAC CAAGTATGTT GCACATCTTT GTGCTAGCAT TTGAGGAGCG TGTGATGTCT 
GATAACGATT ATCGACCTAA ATTTGATCCC CAAACTGGCC AGCCCATCCC GAACCAACCC
CAAGGCGGTT ATCCACCACC ACCGCCTCAA GGTGGCTATC CACCACCACC GCCCCAACCA
AACTATGGTG CTCCAGCAGC AGGTGGCTAC ACCATGGCCA GCGAGCCAGG CCGCCCGCTC
GATTTGCCCG AACCACCAGT TGCTTTGAGT GGCCGGGGCA TGACCACTGG CTTGCGCTAC
AAAATTATTG GAACTGTGCT CCAAGCAGCG ATCATCGAGC TTGATCCAGG CCAGATGATC
TTCTCGGAAA GCGGCGGGAT GTCGTGGATG AGCGGCAACG TTCAGATGAA CACGAATTCT
GGCGGCGGTA TCGGCAAGAT GTTCAAACGG GCTTTCTCAG GCGAATCGTT GTTCATTGTC
GATTTCACGG TTGCAGGCGG CACTGGTTTG ATTGGTTTTG CCAGCGAAAT GCCCGGCAAG
ATTGTGCCAT TGCACCTCGC CCCCGGCCAA GAAATCATCA TGCAAAAAGA TTCGTTTATG
TGTGCCGAAA AGTCGGTTCA GCTTGATATT CACTTCCGCC GTAAATTGGG CGCAGGCCTG
TTTGGCGGCG AAGGCTTTAT CATGCAACGC GCGACTGGCC CAGGCGTGGT TTTTGCCGAG
CTTGATGGCG AAGTCGTCGA ATATTACTTG CAACCAGGCC AGGTGATGAA GGTCGATACT
GGTCACGTGG CGATGTATGA GCCAAGCGTC CAGTTCGATA TTGAAATGGT TCGCGGTTTC
AAGAATATTC TCTTCGGCGG CGAAGGCTTG TTCCTGGCAA CCTTGCGCGG CCCTGGTAAA
GTTTGGCTGC AAACCATGCC TGTCATGAAC GTTGCCAAGA AATTGGCCGA ATACATGCCA
GCCAGTGGTG GCGGCGGCAG CGCTGGCGGT AACATCATCG GCAGCATTCT CGGCGGCGAC
TAA
 
Protein sequence
MQLPSMLHIF VLAFEERVMS DNDYRPKFDP QTGQPIPNQP QGGYPPPPPQ GGYPPPPPQP 
NYGAPAAGGY TMASEPGRPL DLPEPPVALS GRGMTTGLRY KIIGTVLQAA IIELDPGQMI
FSESGGMSWM SGNVQMNTNS GGGIGKMFKR AFSGESLFIV DFTVAGGTGL IGFASEMPGK
IVPLHLAPGQ EIIMQKDSFM CAEKSVQLDI HFRRKLGAGL FGGEGFIMQR ATGPGVVFAE
LDGEVVEYYL QPGQVMKVDT GHVAMYEPSV QFDIEMVRGF KNILFGGEGL FLATLRGPGK
VWLQTMPVMN VAKKLAEYMP ASGGGGSAGG NIIGSILGGD