| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4248 |
|---|
| Symbol | |
|---|
| ID | 5736102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 5420279 |
|---|
| End bp | 5421517 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641281403 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001547008 |
|---|
| Protein GI | 159900761 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.646884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAA CTGTGCAACT GATCTTATTG CTGTTGGTGT TAATCGGTGT TGCTAAAATT
GGGGGCGCAC TTAGTGCCGC GCTTGGCCAA CCAACCGTGT TGGGTAAGCT GTTGGCGGGC
GTGCTGCTTG GCCCAAGTTT AATTAATGTC ATGCACTGGG AAACCTTTCA AAGCAGCGAT
CTGAAATCGA CCATCCACTA CCTCTCGGAG CTTGGGGTCA TTTTCCTCAT GTTTATCGCA
GGCCTGCGCA TCGAAGCCCA TGAGTTGCGC GAAGCTGGCA AGGCCGCAAC TTGGACAGCG
ATTTTGGGTG TGATCATTCC ATTTTTTGGT GGGCTGCTCA GCGCGTTGGC TTTTGGCTAT
GGCCTTATTC CAGCGATTTT TGTGGGCCTA TTGTTGACCG CAACCAGCGT TAGCATTTCG
GCTCAAACCT TGGTTGAGTT GGGGCGGCTC AAAAGTCGAG TTGGTACAAC GTTGCTAGGC
GCGGCGGTGC TCGACGATAT TATTGGGCTG CTGTTACTCT CAATTTTTAT GGCCACTCAA
ACCAGCGATG GCAACTTCAT GACGATTGTT TGGACGATTG TACGCTTGGT GGGCTTTTTG
GTGGTGGCTT GGTTCTTGGG CCAGCGCTTT TTGCCGCGCA TCCTTGAACG GGTCAAAAAA
ATGCGCACCA ACGAGCCAGT GCTCACCTTT GCGGTGTTGG TGGTGCTTGG CTTAGCCTTC
ACGGCTGAAA CGGTGGGGCA TTTGGCCGCA ATTACCGGGG CATTTATGGC CGGTATTCTC
CTGAGCCATA CCGATGTGCG CGATGAAATT GACCGCTCAA TTTCGAGCTT TACCTATGCC
GTACTTGTGC CAATTTTCTT TATTGGAATT GGATTGAACA CCGATTTGAG CAGCCTCAGC
GGTGCAGCCA TCCCAATGGC CATTATGTTG TGTATCGTAG CGATTGGTAC CAAAATTGTG
GGCTGTGGCC TAGGAGCCAA AATTGCTGGC CTCAACCAAC GTGAGGCAAT TCAGGTTGGC
TGTGGCATGA TCTCGCGCGG CGAGGTCGGG TTAATTGTCG CCTCGCTGGG TGTCCAAAAT
CAAATTGTTG ATACTAATGT ATTTTCATTG ACCGTAGCAG TAGTCTTGGT AACCACTCTC
GTCACGCCAA TTCTGCTGAA ATGGTCATTC AAAACCGAGC CATTGCCAAG CCTCCACTTG
GCGCTTGAGC CTGAAGATGA AGTGTTGGCA ATTGGCTAA
|
|---|
| Protein sequence | MSSTVQLILL LLVLIGVAKI GGALSAALGQ PTVLGKLLAG VLLGPSLINV MHWETFQSSD
LKSTIHYLSE LGVIFLMFIA GLRIEAHELR EAGKAATWTA ILGVIIPFFG GLLSALAFGY
GLIPAIFVGL LLTATSVSIS AQTLVELGRL KSRVGTTLLG AAVLDDIIGL LLLSIFMATQ
TSDGNFMTIV WTIVRLVGFL VVAWFLGQRF LPRILERVKK MRTNEPVLTF AVLVVLGLAF
TAETVGHLAA ITGAFMAGIL LSHTDVRDEI DRSISSFTYA VLVPIFFIGI GLNTDLSSLS
GAAIPMAIML CIVAIGTKIV GCGLGAKIAG LNQREAIQVG CGMISRGEVG LIVASLGVQN
QIVDTNVFSL TVAVVLVTTL VTPILLKWSF KTEPLPSLHL ALEPEDEVLA IG
|
|---|
| |