| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4182 |
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| Symbol | |
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| ID | 5736044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5334020 |
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| End bp | 5335324 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641281337 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_001546942 |
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| Protein GI | 159900695 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.953072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCGG TTGATCTGAT TATTAAAAAA CGCAATGGAG CACAGCTCTC AACCGAAGAA
ATTCAATGGC TGATTCAGGG CTATACCAAC GGCAGTGTGC CCGATTATCA GATGGCGGCG
TGGGCCATGG CGGTTGTGCT CAAAGGCATG GATGATCGCG AAACCACCGA TTTAACCCTT
GCCATGGCCG CTTCGGGCGA TCAGCTCGAT TTGCGTGATT TCGCGCCCGA TGCCGTTGAT
AAGCACTCGA CTGGCGGGGT TGGCGATAAA ACTAGCCTTG TGCTGGGGCC AATGTTGGCA
GCCGTTGGTT TGCAAGTTGC CAAAATGTCG GGGCGGGGCT TGGGCTTTTC GGGCGGCACG
CTCGATAAAC TTGAGGCCAT CCCCAACATG CGCATCGACC TGAGCGAAGA TGAGTTTCGC
CATGCCATGC GTGAGATTGG CATGGTGATT ATGGGCCAAA CTGCTGATCT CGCACCTGCC
GACAAAAAGC TGTATGCGTT GCGCGATGTG ACTGGCACTG TCGAATGTAT TCCGCTGATT
GCAGCCAGCA TTATGAGCAA AAAGCTGGCG GCTGGAGCCA AAAGCATCGT ACTCGATGTC
AAGGTTGGGG CGGGGGCGTT TATGAAAACC CTCGATCAAG CCCGTGATTT GGCCCGAACG
ATGGTGCGGA TCGGCCAATT GGCTGGCCGC AATGTCGCTG CGATCCTTTC GTCGATGGAG
CAACCGTTGG GCTTGACGAT CGGTAATGCG CTGGAAGTGC GCGAAGCGAT TGAAACGCTC
CAAGGTCGCG GCCCCGGCGA TTTGGTTGAA GTTTGTTTGA CCCTTGGCTC ACATCTGTTG
GTTTTGGCTG GCAAGGCCCA AAATCTTGAT GATGCCCGCC AACAGTTGCA AGCAAGCTTG
GATAACGGCC AAGCTTGGGC TAAATTCCGT GAGTTTGTTG CCCAGCAAGG CGGCGATCTC
ACGGTGATTG ACCAACCAGA AACCCTGCCA ATCGCCCCAA TTCAAATCAG TTTGCTGGCC
GAGAGCAGCG GCTTTGTCCA ACGCATCGAT GCCGAAACCT GTGGGATTGT GGCGACCGAG
CTTGGAGCTG GTCGCGCCCG CAAAGAAGAT GCGATCGATC CGGCGGTGGG CTTGGTGCTT
GAGCGTAAAG TTGGCGAGCC AGTTCAAGCG GGCGAGGCCT TGTTGACAGT GCATGCTGCT
GATCAGCAAC GGGCCGAGGT TGCTTTGGCC GCACTCAAAT CGGCAATTAC GATCAGTGCT
ACGTCGGTTG AAGCCTTGCC CTTGGTTTTC GAAAGCGTTG CCTAG
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| Protein sequence | MRAVDLIIKK RNGAQLSTEE IQWLIQGYTN GSVPDYQMAA WAMAVVLKGM DDRETTDLTL
AMAASGDQLD LRDFAPDAVD KHSTGGVGDK TSLVLGPMLA AVGLQVAKMS GRGLGFSGGT
LDKLEAIPNM RIDLSEDEFR HAMREIGMVI MGQTADLAPA DKKLYALRDV TGTVECIPLI
AASIMSKKLA AGAKSIVLDV KVGAGAFMKT LDQARDLART MVRIGQLAGR NVAAILSSME
QPLGLTIGNA LEVREAIETL QGRGPGDLVE VCLTLGSHLL VLAGKAQNLD DARQQLQASL
DNGQAWAKFR EFVAQQGGDL TVIDQPETLP IAPIQISLLA ESSGFVQRID AETCGIVATE
LGAGRARKED AIDPAVGLVL ERKVGEPVQA GEALLTVHAA DQQRAEVALA ALKSAITISA
TSVEALPLVF ESVA
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