Gene Haur_4073 details

Gene Information

• Locus tag: Haur_4073
• Symbol: atpC
• ID: 5735931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 5199554
• End bp: 5199964
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641281224
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001546833
• Protein GI: 159900586
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000149608
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATCC AATTGGAAAT CGTCACCGCT GAGCGCGTGG TTCTTTCCGA AGAAGTCGAT 
ATGGTCAGTG CGCCTTCAGT CGAGGGTCGG GTGGGGATTT TGCCTCGCCA CGAGCCATTG 
CTGACGGTGT TGCAACCAGG CGAATTGCAC TATGTGAAAA ATGGTGTTAG CATGCCCTAC 
GCTATCAGCG GTGGCTTCAT GGAAGTCTTG CCAAATCGCG TGACGATTTT GGCCGATACC 
GCTGAACGCG CTGATGAAAT CGATGAAACC CGCGCCGAAC AAGCTCGCTT GCAAGCCGAA 
CAAGCTATGC GCGATCGTCA AAGCACCGAG GATCTTGCTC GGGCCGAGAT TGCCTTGCGC 
CGCGCCACAG TTCGTTTGCA AGTTGCGAAA TTGCGCCGCA ACCGTCAATA G 

 

Protein sequence

MPIQLEIVTA ERVVLSEEVD MVSAPSVEGR VGILPRHEPL LTVLQPGELH YVKNGVSMPY 
AISGGFMEVL PNRVTILADT AERADEIDET RAEQARLQAE QAMRDRQSTE DLARAEIALR 
RATVRLQVAK LRRNRQ