Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3924 |
Symbol | recR |
ID | 5735785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4917876 |
End bp | 4918490 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641281075 |
Product | recombination protein RecR |
Protein accession | YP_001546686 |
Protein GI | 159900439 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00096202 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCATTTG GGTACGATAC GATTACACCA GAACCAGTCG CAAAATTAAT TGATGAATTT AATCGCTTGC CTGGCATTGG GCCAAAATCG GCCTCGCGCT TGGTTTTTTA CCTGCTCCGC GCCAAACGTG AGCAATCTGA GCGCTTGGCC AACGCGATTA TGGCCATGAA AGATAGCACG ATCTTTTGTA ATCGCTGCTT TAACATTACG GTCGAAGACC CTTGCACAAT TTGCACAAAT GCCAATCGCA ATGAGCGCCA AGTGTGCGTG GTCGAGGAGC CGCTCGATGT GGTGGCCTTA GAACGCACGG GCGAATTCAA AGGCCTGTAT CATGTGCTGC ACGGGGCAAT CTCACCAGTC GAAGGCATCA ATCCCGAAGA TTTGCGGATT CGTGAGTTGT TGGCTCGCTT GCGGGTCGAG CCAATTGAAG AAGTGATTCT TTCGACCAAT CCCAATCTTG AGGGCGATGC CACTGCGGCC TATCTGGCCC GCGAGATTAT CCCTTTGGGT ATTCGGGTAA CGCGCTTGGC GCGGGGCTTG CCAATGGGTA GCGATCTTGA ATATGCCGAT GAAGTAACCT TGGGGCGAGC ATTGCAGGGC CGTCGCGAAA TGTAA
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Protein sequence | MAFGYDTITP EPVAKLIDEF NRLPGIGPKS ASRLVFYLLR AKREQSERLA NAIMAMKDST IFCNRCFNIT VEDPCTICTN ANRNERQVCV VEEPLDVVAL ERTGEFKGLY HVLHGAISPV EGINPEDLRI RELLARLRVE PIEEVILSTN PNLEGDATAA YLAREIIPLG IRVTRLARGL PMGSDLEYAD EVTLGRALQG RREM
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