Gene Haur_3817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3817 
Symbol 
ID5735681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4791123 
End bp4792013 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content51% 
IMG OID641280969 
Producthypothetical protein 
Protein accessionYP_001546581 
Protein GI159900334 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000393324 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCAG TGCAAATCTC AACCAATCAG AATCGGGTCG AAATACCATG GCGAGCCTAT 
GTGGCGCTGG CAATTGGCAT TGTGTGTATC GCATTATCGG CAATTTGGGT CAAGTGGGCG
GCTGTGCCTG GGCCAGTTTC GGCCTTTTAT CGCATGCTGA TTCCAGCGGC GATTTTGCTG
CCATGGTGGT TTGCCAAACG GCCTAAGCAT CTGCCCAAGC AAGCTACGCG GCTTTCGCTG
CTTGGCGGCG TTTTCTTTGC CTTCGATTTA GCCCTGTGGA ATAGCGCAAT TTTGCTGACT
TCAGCTGCCA ACTCAACCCT GTTTGCCAAT AATGCCCCGC TCTGGGTTGG CTTGGGTGCT
TGGTTGATTT TTCGCGAACG CTTGCCGCAA CGCTTTTGGT GGGGCATGGC GATTGCCCTG
ATTGGCGTGG TGGTAATCAT GGGCGAGAAT TTGCAACAAC TTACCATGAG CCAAGGCGAT
TTGTTGGCGA TCTCGGCAGG TGGTTTTTAT GCGGCCTATT TGCTCACGAC CCAACGCGCC
CGCGCTGAAC TGGATACCTT GACCTTTATG ACTTTGGGAA TCGTGGTCAG CGTGGTGATT
TTGGGCTTGA TGTGTTTGAT TGGCGGCTAT AGCATCATTG GGTTTAGCCC CCAAACATGG
TGGTCGTTGA TGGGTTTGGG CTTGGTTTCA CACCTCGGCG GTTGGCTGGC GATCAACTAT
GCACTTGGGC ATATCAAAGC TGCGACGGCT TCAGTCAGTT TGTTGGGCCA GCCAGTCTTA
ACAGCCTTGA TCTCAATTCC GCTCTTGAAT GAATCATTAA ATATCTTTCA AATTATTGGC
GGTAGCTTGG TGATTGGCGG AATTTGGCTG GTTAACACCC AAAAAGCGTA A
 
Protein sequence
MQAVQISTNQ NRVEIPWRAY VALAIGIVCI ALSAIWVKWA AVPGPVSAFY RMLIPAAILL 
PWWFAKRPKH LPKQATRLSL LGGVFFAFDL ALWNSAILLT SAANSTLFAN NAPLWVGLGA
WLIFRERLPQ RFWWGMAIAL IGVVVIMGEN LQQLTMSQGD LLAISAGGFY AAYLLTTQRA
RAELDTLTFM TLGIVVSVVI LGLMCLIGGY SIIGFSPQTW WSLMGLGLVS HLGGWLAINY
ALGHIKAATA SVSLLGQPVL TALISIPLLN ESLNIFQIIG GSLVIGGIWL VNTQKA