Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3816 |
Symbol | |
ID | 5735680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4790380 |
End bp | 4790937 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641280968 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001546580 |
Protein GI | 159900333 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000023862 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAACT TGACCTTTAG TCTCAACATC ACCCTCGACG GGTGCATCGA TCACCAGGCA GGCATCGCCG ACGACGAGAC CCATGCCTTC TTCACCCAAC TGATGGATGA GAGCGGGGCG ATGCTCTGGG GTCGTATCAC CTACGAGATG ATGGAAAGCG CCTGGCCAGC GGTCGCTCGC GGAACCACCG AGGCAGCGCA GTCGCTGCGC GAGTGGGCGA TCAAGCTGGA GGCCAAGCCT AAGTACGTGG TGTCCTCCAC GCGAACGGAT TTCCCTTGGA CGAACAGCCA CCTGATCACG GGCAATCTGC GCACGGCTGT CCAGCAGCTT AAGGACACAA CTCCAAATGG TGTGCTTCTC GGGAGCGGCA GGCTCGCGAC CGAGCTAGAC CGACTAGATC TGATCAATGA GTACAAGTTC CTCATCCACC CGAGGATCGC TGGCCATGGC CCTACTTTGT ACGCAAGTGG GCTGTCCAAC GCACGCCGAC TCACGTTGAT CTCGGCAATC CCGCTGCGCA ACGGAACGGT CGCCATGCAC TACCAGCGTG CCCGTTGA
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Protein sequence | MGNLTFSLNI TLDGCIDHQA GIADDETHAF FTQLMDESGA MLWGRITYEM MESAWPAVAR GTTEAAQSLR EWAIKLEAKP KYVVSSTRTD FPWTNSHLIT GNLRTAVQQL KDTTPNGVLL GSGRLATELD RLDLINEYKF LIHPRIAGHG PTLYASGLSN ARRLTLISAI PLRNGTVAMH YQRAR
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