| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3808 |
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| Symbol | |
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| ID | 5735672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 4779792 |
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| End bp | 4780673 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641280960 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001546572 |
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| Protein GI | 159900325 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000407513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACTT CAACATTTAC CACCAAAGTC GGCTTGGCCC AAATGCTCAA GGGCGGCGTG
ATTATGGATG TGGTTACGCC AGACCAAGCT AAAATTGCTG AAGAAGCTGG CGCAGTCGCC
GTGATGGCGC TCGAACGGGT TCCAGCCGAT ATTCGTAAGG ATGGCGGCGT GGCTCGTATG
AGCGACCCCG AAATGATCCA AGGCATCATT GAAGCAGTCA CCATTCCTGT GATGGCTAAA
TCACGGATTG GTCACTTTGT TGAAGCGCAA ATCCTCGAAG CGATTGGGGT TGATTATATT
GACGAGAGCG AAGTGCTCAC GCCTGCTGAT GAAGAACATC ATACCAACAA GCACAATTTC
AAAGTGCCAT TCGTCTGTGG CGCTCGTAAT TTGGGCGAAG CCTTGCGCCG CATCACCGAA
GGCGCAGCCA TGATTCGCAC TAAGGGCGAA GCTGGCACGG GCAATGTGGT TGAAGCTGTG
CGCCACGCTC GCACGATGTT CGCCGAAATT CGCCGTTTGC AAACCCTCGA TCCCGATGAG
TTGTTTGTGG CTGCCAAAAA CTTGCAAGCT CCCTATGAAT TGGTCAAGCA AATTGCTGAA
TTAGGCCGCT TACCAGTTGT CAATTTCGCT GCTGGCGGGA TTGCAACTCC AGCCGATGCT
GCTTTGATGA TGCAATTGGG TGTTGATGGC GTGTTCGTTG GCTCAGGGAT TTTCAAATCG
GGCAATCCTG CCAAACGCGC TAAAGCAATT GTTGAAGCAA CCACCCACTT CCGCGATGCC
AAGCTTTTGG CCGAAATTAG CCGCAACTTG GGCGAAGCCA TGGTCGGCAT CAACATCGAT
ACCATCCCAG AGAACGAGTT GCTCGCCAAA CGCGGTTGGT AA
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| Protein sequence | METSTFTTKV GLAQMLKGGV IMDVVTPDQA KIAEEAGAVA VMALERVPAD IRKDGGVARM
SDPEMIQGII EAVTIPVMAK SRIGHFVEAQ ILEAIGVDYI DESEVLTPAD EEHHTNKHNF
KVPFVCGARN LGEALRRITE GAAMIRTKGE AGTGNVVEAV RHARTMFAEI RRLQTLDPDE
LFVAAKNLQA PYELVKQIAE LGRLPVVNFA AGGIATPADA ALMMQLGVDG VFVGSGIFKS
GNPAKRAKAI VEATTHFRDA KLLAEISRNL GEAMVGINID TIPENELLAK RGW
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