Gene Haur_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3678 
Symbol 
ID5735554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4621178 
End bp4621480 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content50% 
IMG OID641280827 
Productchaperonin Cpn10 
Protein accessionYP_001546442 
Protein GI159900195 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0234] Co-chaperonin GroES (HSP10) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00275768 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT TCCGGATTCG CCCCTTGGCC GATCGTGTGG TGATCAAGCC TCAAGCCAAA 
GAAGAAAAAA CCAAGAGTGG CTTGTTCCTG CCCGACACAG CGAATAAAGA AAAGCCTCAA
GAAGGCCTCG TTGTGGCCGT TGGTGAAGGC AAGTTGGATG ATAACGGCAA GCGCGTGCCA
GTTGCAGTGC AAGTTGGTGA TCGGGTGCTG TTTGCCAAAT ATGCTGGCAC CGAGATCAAG
CTGGACGACG AAGATTATTT GATTTTGGCT GAAAAAGATA TTTTGGCCGT CGTTCAAGGC
TAA
 
Protein sequence
MSDFRIRPLA DRVVIKPQAK EEKTKSGLFL PDTANKEKPQ EGLVVAVGEG KLDDNGKRVP 
VAVQVGDRVL FAKYAGTEIK LDDEDYLILA EKDILAVVQG