Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3621 |
Symbol | |
ID | 5735482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4551188 |
End bp | 4552354 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641280770 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001546385 |
Protein GI | 159900138 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGTT CTCCGCTCGA TGGCCTGCTC GTGCTCGACC TCTCACGGGT GCTGGCAGGC CCATATTGCA CCATGATTCT TGGCGATCTT GGGGCTGATG TGATTAAAGT TGAAGCGCCG CAAGGCGATG ATACCCGCCG CTGGGGGCCG CCGTTTGTTG CTGGCGAGAG CGCCTACTAT TTGGCGGTCA ATCGCAATAA ACGCTCATTG GTCGCCGATC TCAAAACTGC CACTGATGCT GCGTTGATTC GCACAATCGC CAACCACTCC GATATTGTGG TTGAGAACTT TCGGCCTGGC ACGCTCGAAC GCTTTGGCTT GAGTTTAGCC AGCCTGCGCG AGCAAAATCC CCGTTTGATC ACGCTCACAA TCAGCGGAAT GGGCGCGACT GGGCCTGAAG CTGAGCTGCC AGGCTATGAT TTTATTGTGC AAGCGACTGC AGGTTTGATG AGCATTACCG GACCCGCCGA GGGCGAGGCC AGCAAAGTTG GAGTTGCTGT CGTCGATTTG ACGACTGGAA TGTTGGCGAG CAACGCGATT TTGGCGGCGT TGTATGCCCG AGAACGCACA GGTTTGGGGC AGCATATTGA TATTTCGCTG TTAGAAGCCC AAGTTGCTTG GTTGGCGAAT GTTGGCAGTG CCTATTTGGT AACTGGCGAG GAGCCAAACC GCTATGGTAA TGCTCACCCT ACGATTGTGC CCTATCAAAC CTTTGAGGCC AGCGATGGCG CGTTTGCCTT GGCCGTCGGC AATGATCGCC AATGGCAACA GTTATGTGCT GTTTTGCAAC AACCAGCTTG GGCGGAAGAT CCACGCTTTA GCACCAACCC GCAACGAGTG CAGTACCGCA GCGCATTGGT TGATTTGCTG AATCACCAGT TCGGCCAAAA ACCAAGCGCC GAGTGGGTGG CGTTAATTCA GGCGGCGGGC ATTCCGGTGG GCGCAGTGCG CAGCGTTGGT CAAGTGTTGA ACGACCCGCA GGTGTTGGCA CGTGAAATGG TGGTCAGTGT GCCACACCCA ACGATTGGTG ATTTAAAAGT CTTGGGAATT CCGTTTAAAT TCTCGGCAAC ACCCGCGAGT ATTCGTTTGG CCCCACCACT ACTGGGACAA CATAGCCAAG AAATTCACCA ACAATTTAAC CCAAAAGTAC CATCTAAAAC CGACTGA
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Protein sequence | MLSSPLDGLL VLDLSRVLAG PYCTMILGDL GADVIKVEAP QGDDTRRWGP PFVAGESAYY LAVNRNKRSL VADLKTATDA ALIRTIANHS DIVVENFRPG TLERFGLSLA SLREQNPRLI TLTISGMGAT GPEAELPGYD FIVQATAGLM SITGPAEGEA SKVGVAVVDL TTGMLASNAI LAALYARERT GLGQHIDISL LEAQVAWLAN VGSAYLVTGE EPNRYGNAHP TIVPYQTFEA SDGAFALAVG NDRQWQQLCA VLQQPAWAED PRFSTNPQRV QYRSALVDLL NHQFGQKPSA EWVALIQAAG IPVGAVRSVG QVLNDPQVLA REMVVSVPHP TIGDLKVLGI PFKFSATPAS IRLAPPLLGQ HSQEIHQQFN PKVPSKTD
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