Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3549 |
Symbol | |
ID | 5735408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4466067 |
End bp | 4466867 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280696 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001546313 |
Protein GI | 159900066 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATGC ACACACCCTT AACGGGCAAG CGAATTGTGT TGACCCGCGC CCGTGAGCAG ATGACCGAGT TCGCTCAACT CTTGGCAGAC CATGGAGCCG AAACGCTCTA TTGCTCGGCA ATTCAAACCC TACCACCCGA CGATTGGCAA CCATTTGACC GCGCTCTGAG CCAAATTGAA GGCTTCGATT GGATGATTGC TACCAGTACC AACGCCGTGC GAGCGTTCTT CGAGCGTTAT GGGGTTTTAG GCTTGCCCTG CAACGCCTTA AATCAATTAA AAATTGCCGC GATTGGCAAG GCTACCGCCA AATTATTAAC TGATTTTGGC CATGCGCCCG ATTTTGTGCC GCATGCCTAT GTTGCCGAGC AATTTCTCGT CGAATTTCAA GATATTGCTG GCCAACGCAT TTTTCTGCCC CAAGCTGATA TTGCACGCCC ACTGTTGCGC GAAGCATTAA TCGAACGTGG CGCAGACGTA ACGGCGGTGG TGGCTTATCG CACCGTGCCC GATCCACAGG TAGTCGCATT GGCTGAGTTG CTACGTCAGC AACGGGTTGA TGTGGTGACA TTCACCTCAA GTTCAACCGT GCGCTACACC ATCGAAGCCT TGCATGCGGC AGGTATGCGC AATTCACAAG AATTTTTAAA TCAGACAATC ATTGCAACAA TTGGCCCTAT CACCAGCCAA ACCGCGCTTG ATGTGGGCTT GCATGTTGAT ATAGAGGCAG CGGAACATTC AACCCAAGGC TTAGTTGAAG CCCTGCTTGA ATGGGCCAAA ACCGAGAAGG AACTGGCATG A
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Protein sequence | MTMHTPLTGK RIVLTRAREQ MTEFAQLLAD HGAETLYCSA IQTLPPDDWQ PFDRALSQIE GFDWMIATST NAVRAFFERY GVLGLPCNAL NQLKIAAIGK ATAKLLTDFG HAPDFVPHAY VAEQFLVEFQ DIAGQRIFLP QADIARPLLR EALIERGADV TAVVAYRTVP DPQVVALAEL LRQQRVDVVT FTSSSTVRYT IEALHAAGMR NSQEFLNQTI IATIGPITSQ TALDVGLHVD IEAAEHSTQG LVEALLEWAK TEKELA
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