Gene Haur_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3549 
Symbol 
ID5735408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4466067 
End bp4466867 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID641280696 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001546313 
Protein GI159900066 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGC ACACACCCTT AACGGGCAAG CGAATTGTGT TGACCCGCGC CCGTGAGCAG 
ATGACCGAGT TCGCTCAACT CTTGGCAGAC CATGGAGCCG AAACGCTCTA TTGCTCGGCA
ATTCAAACCC TACCACCCGA CGATTGGCAA CCATTTGACC GCGCTCTGAG CCAAATTGAA
GGCTTCGATT GGATGATTGC TACCAGTACC AACGCCGTGC GAGCGTTCTT CGAGCGTTAT
GGGGTTTTAG GCTTGCCCTG CAACGCCTTA AATCAATTAA AAATTGCCGC GATTGGCAAG
GCTACCGCCA AATTATTAAC TGATTTTGGC CATGCGCCCG ATTTTGTGCC GCATGCCTAT
GTTGCCGAGC AATTTCTCGT CGAATTTCAA GATATTGCTG GCCAACGCAT TTTTCTGCCC
CAAGCTGATA TTGCACGCCC ACTGTTGCGC GAAGCATTAA TCGAACGTGG CGCAGACGTA
ACGGCGGTGG TGGCTTATCG CACCGTGCCC GATCCACAGG TAGTCGCATT GGCTGAGTTG
CTACGTCAGC AACGGGTTGA TGTGGTGACA TTCACCTCAA GTTCAACCGT GCGCTACACC
ATCGAAGCCT TGCATGCGGC AGGTATGCGC AATTCACAAG AATTTTTAAA TCAGACAATC
ATTGCAACAA TTGGCCCTAT CACCAGCCAA ACCGCGCTTG ATGTGGGCTT GCATGTTGAT
ATAGAGGCAG CGGAACATTC AACCCAAGGC TTAGTTGAAG CCCTGCTTGA ATGGGCCAAA
ACCGAGAAGG AACTGGCATG A
 
Protein sequence
MTMHTPLTGK RIVLTRAREQ MTEFAQLLAD HGAETLYCSA IQTLPPDDWQ PFDRALSQIE 
GFDWMIATST NAVRAFFERY GVLGLPCNAL NQLKIAAIGK ATAKLLTDFG HAPDFVPHAY
VAEQFLVEFQ DIAGQRIFLP QADIARPLLR EALIERGADV TAVVAYRTVP DPQVVALAEL
LRQQRVDVVT FTSSSTVRYT IEALHAAGMR NSQEFLNQTI IATIGPITSQ TALDVGLHVD
IEAAEHSTQG LVEALLEWAK TEKELA