Gene Haur_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3543 
Symbol 
ID5735402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp4459849 
End bp4460472 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content56% 
IMG OID641280690 
ProductDNA binding domain-containing protein 
Protein accessionYP_001546307 
Protein GI159900060 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000932058 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAT TAAGCATCGA CATCGACCCA GAATGGCTTT CGTTGAGCGA GGCCAGCGAT 
TTACTCGGCG CAGCACCTTC AACGGTGCGC CGTTGGGGCG ACGCTGGTTT AGTGCCAACC 
AAACGCACGC TTGGCGGCCA TCGCCGTTTT CAACGGGCAG CGGTTGAGCG CATGGTCAAT 
CAGCAACAGC CCGATCATAC GCCAGTGCCC GAATTAGGCC AAACCCGCCA TTGGCATCTC 
GATACTCGCG AGTTGATGGG CCAAGGTTGG CACGCTCGGT TTGATACCAA CCCAACCACC 
GAGCGCATGC GCGGCTTAGG CCAACGTTTG TTTGGCATGT TGATGCAATA TGTCAATAGC 
AACGAGCTTG ATGAGCGCAT CTTGGCCGAG GCCAAAGCTG TTGGGGCTAC CTATGGGCGC 
GAAGCTCGCG AAATGGGAGT CTCGATGCAC GATACAGTCG AGGCCTTTTT GTTTTTTCGG 
CGGGCGTTTG CCCAGTTGGC CAAGCCACAA TCGGTCCGTC CAATCGATGT GGCAACCGTC 
GTAGAACTGC GGACACGCCT CGATTTGTTT ATGGATGCAA CGCTGCTCGG AACAATCGAA 
GGTTTTGAAC AAGCAGGCTC GTAA
 
Protein sequence
MTELSIDIDP EWLSLSEASD LLGAAPSTVR RWGDAGLVPT KRTLGGHRRF QRAAVERMVN 
QQQPDHTPVP ELGQTRHWHL DTRELMGQGW HARFDTNPTT ERMRGLGQRL FGMLMQYVNS 
NELDERILAE AKAVGATYGR EAREMGVSMH DTVEAFLFFR RAFAQLAKPQ SVRPIDVATV 
VELRTRLDLF MDATLLGTIE GFEQAGS