Gene Haur_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3498 
Symbol 
ID5735359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp4405840 
End bp4406808 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content50% 
IMG OID641280645 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001546262 
Protein GI159900015 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAAT CCGATGTTTT GTTGAAACTC AAGGGTGTCA AAACCTACTT TTTCACCGAT 
GAAGGCACTG TCCATGCTGT CGATGGCCTC GATTTTCAGG TGCGTCGTGG CGAAACCTTG 
GGCATCGTCG GCGAATCTGG TTGTGGCAAA AGCGTAACGT CCATGTCGAT CTTACGTTTG 
TTGGGCAAAA CTGGTAAAGT CATCGAAGGC GAAATTATGT TCGATGGCGA GAATTTGCTC 
GACCTGAGTG AAGAAGAAAT GCGCAAAATC CGTGGCAATC GGATTTCAAT GATTTTCCAA 
CAGCCAACGA CCTGTCTGAA TCCTGTTTTC CGCATCGGCG AACAGATTAT CGAGGCCTTG 
CAAATTCACC AAGGGCTTTC GGGCGAGGAA GCCAATAAAC GCACGATTGA GCTGCTTACT 
TTAGTTGGTT TGCCCGACCC CGTGCGTCGG ATGCGTTCGT TCCCCCACGA AATTTCTGGC 
GGTCAGGCCC AACGGGTGAT GATCGCGATG GCCTTGGCAT GTAACCCTGA ATTGTTGATT 
GCCGATGAGC CAACGACTGC ACTTGACGTA ACGATTCAAG CCCAAATCTT GGATCTGATG 
CGCGAGTTGC GCGAAAAGGT TAATACTGCA ATTATTTTGA TTACCCACGA TTTAGGGGTG 
GTGGCCGAAA TGGCCGAAAA TGTGATGGTG ATGTATGCCG GTAAGGCGGT TGAATATGCG 
CCTGTCCATG CGCTGTTTGA AGCACCCAAA CACCCCTATA CCCAAGGCTT GATCGCTTCA 
ACGCCAGTTT TGGGCAATGT GCGCGATGAA TTAGAGACAA TTCCTGGCCA AGTTCCAAGT 
TTGTTGAACC CGCCAGCAGG TTGTCGGTTT GCTTCACGCT GTGCCCACAA AATGGATCAA 
TGTACGCAAG AAGAACCCCC GTTGATCAAG CTTGAAGGTG ATCGACTGGT ACGTTGCTGG 
TTGTACTAG
 
Protein sequence
MAQSDVLLKL KGVKTYFFTD EGTVHAVDGL DFQVRRGETL GIVGESGCGK SVTSMSILRL 
LGKTGKVIEG EIMFDGENLL DLSEEEMRKI RGNRISMIFQ QPTTCLNPVF RIGEQIIEAL 
QIHQGLSGEE ANKRTIELLT LVGLPDPVRR MRSFPHEISG GQAQRVMIAM ALACNPELLI 
ADEPTTALDV TIQAQILDLM RELREKVNTA IILITHDLGV VAEMAENVMV MYAGKAVEYA 
PVHALFEAPK HPYTQGLIAS TPVLGNVRDE LETIPGQVPS LLNPPAGCRF ASRCAHKMDQ 
CTQEEPPLIK LEGDRLVRCW LY