Gene Haur_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3454 
Symbol 
ID5735315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4343842 
End bp4344738 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content56% 
IMG OID641280601 
ProductLysR family transcriptional regulator 
Protein accessionYP_001546218 
Protein GI159899971 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTAA GCCAATTGCG CTATTTTGAG GCGGTGGCTC GCTTGGGCAA TGTGACGAAG 
GCCGCCCACG AACAACACAT CGCCCAACCA TCGCTAAGCA AAGCCTTACG AGCGCTTGAG
CAAGAATTAG GGGTACATTT GTTTGATCGG GTTGGCCGAG GGGTTGAATT AAGCGATGCT
GGCAAATTAT TGTTGCCCTA TGCGCGACGC GTCTTGGCCG AACTTCAAGC AGCCCGCCAT
GCCTTACAAT CTCGTGCTGA TCTGACGGTG GGCCATGTCT CGTTGGGAGT TACGCCAACC
GTGGGCACGC GGCTCATTCC CCAAGCCTTG GCCGCTTTCA ATCGGCGCTA TCGCGGGATT
CAGCTTGAAT TGCACGAGGC CGGAGCCAGC GAGTTGGTCG AATTGCTCAA TGCTGGGGTG
GTCGATTTGG CGATTGTTTC GGCCTTGGTG CATGGAGTTG AATCAACAAC CTTGATGAGC
GAGCCGTTGG TGGTGGCGGT TGGTTTACAA CATCGTTTTG CCCAACGCCA GAGCATTGCC
GCCAACGAGC TACGTGATGA GGGCTTTATT TTGTTTCCGC AGGGCTACGA GCTGCGCAAT
TATACCTTGC AACTTTGCGA GCAAGCAGGC TTCGCCCCGC GAATTGTGCT CGATGGCGGC
GAGATGGATA CGGTGGTGAG TTTGGTTGCC GCAGGCTTGG GCGTGGCGGT TGTGCCTCAA
TTAGCCATCG ATCAGCGCAT GGGCTTGCAT GCCTTGATGA TCGACGCTGG CGGATTGCAA
CGCACCTTGC GGCTGATCCG CCATAGTCAA CGCCAACCCT CGCCTGCTGC CGCCGCCCTA
CATCGGGTGC TGCACGAATG GGTCAGCCAA CATTATCCCA GTGCTTCAGC AAATTGA
 
Protein sequence
MELSQLRYFE AVARLGNVTK AAHEQHIAQP SLSKALRALE QELGVHLFDR VGRGVELSDA 
GKLLLPYARR VLAELQAARH ALQSRADLTV GHVSLGVTPT VGTRLIPQAL AAFNRRYRGI
QLELHEAGAS ELVELLNAGV VDLAIVSALV HGVESTTLMS EPLVVAVGLQ HRFAQRQSIA
ANELRDEGFI LFPQGYELRN YTLQLCEQAG FAPRIVLDGG EMDTVVSLVA AGLGVAVVPQ
LAIDQRMGLH ALMIDAGGLQ RTLRLIRHSQ RQPSPAAAAL HRVLHEWVSQ HYPSASAN