Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3454 |
Symbol | |
ID | 5735315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4343842 |
End bp | 4344738 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641280601 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001546218 |
Protein GI | 159899971 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTAA GCCAATTGCG CTATTTTGAG GCGGTGGCTC GCTTGGGCAA TGTGACGAAG GCCGCCCACG AACAACACAT CGCCCAACCA TCGCTAAGCA AAGCCTTACG AGCGCTTGAG CAAGAATTAG GGGTACATTT GTTTGATCGG GTTGGCCGAG GGGTTGAATT AAGCGATGCT GGCAAATTAT TGTTGCCCTA TGCGCGACGC GTCTTGGCCG AACTTCAAGC AGCCCGCCAT GCCTTACAAT CTCGTGCTGA TCTGACGGTG GGCCATGTCT CGTTGGGAGT TACGCCAACC GTGGGCACGC GGCTCATTCC CCAAGCCTTG GCCGCTTTCA ATCGGCGCTA TCGCGGGATT CAGCTTGAAT TGCACGAGGC CGGAGCCAGC GAGTTGGTCG AATTGCTCAA TGCTGGGGTG GTCGATTTGG CGATTGTTTC GGCCTTGGTG CATGGAGTTG AATCAACAAC CTTGATGAGC GAGCCGTTGG TGGTGGCGGT TGGTTTACAA CATCGTTTTG CCCAACGCCA GAGCATTGCC GCCAACGAGC TACGTGATGA GGGCTTTATT TTGTTTCCGC AGGGCTACGA GCTGCGCAAT TATACCTTGC AACTTTGCGA GCAAGCAGGC TTCGCCCCGC GAATTGTGCT CGATGGCGGC GAGATGGATA CGGTGGTGAG TTTGGTTGCC GCAGGCTTGG GCGTGGCGGT TGTGCCTCAA TTAGCCATCG ATCAGCGCAT GGGCTTGCAT GCCTTGATGA TCGACGCTGG CGGATTGCAA CGCACCTTGC GGCTGATCCG CCATAGTCAA CGCCAACCCT CGCCTGCTGC CGCCGCCCTA CATCGGGTGC TGCACGAATG GGTCAGCCAA CATTATCCCA GTGCTTCAGC AAATTGA
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Protein sequence | MELSQLRYFE AVARLGNVTK AAHEQHIAQP SLSKALRALE QELGVHLFDR VGRGVELSDA GKLLLPYARR VLAELQAARH ALQSRADLTV GHVSLGVTPT VGTRLIPQAL AAFNRRYRGI QLELHEAGAS ELVELLNAGV VDLAIVSALV HGVESTTLMS EPLVVAVGLQ HRFAQRQSIA ANELRDEGFI LFPQGYELRN YTLQLCEQAG FAPRIVLDGG EMDTVVSLVA AGLGVAVVPQ LAIDQRMGLH ALMIDAGGLQ RTLRLIRHSQ RQPSPAAAAL HRVLHEWVSQ HYPSASAN
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