Gene Haur_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3420 
Symbol 
ID5735281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4309019 
End bp4311526 
Gene Length2508 bp 
Protein Length835 aa 
Translation table11 
GC content51% 
IMG OID641280567 
Productnucleotidyl transferase 
Protein accessionYP_001546184 
Protein GI159899937 
COG category[G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG TTTTAATGGC TGGGGGTGAA GGCTCTCGGC TCCGACCACT CACCATCAGT 
CGGCCCAAAC CAATGGTTCC GCTGGTCGAT CGACCAGTCA TGGGCCATAT TATTGAACTT
CTGAAACGCC ACGGCATCAC CGATATTATT ATTACGGTGC AATATCTCGC CAATATTATT
CAAGATTTTT ATGGCGATGG CTCGGCGTTT GATGTCGATA TTTCGTATTC GGTTGAGGAA
GTGCCACTCG GCACGGCTGG TGCAGTTAAA TATGCTTCAC GCTTGATCGA TGATGATAGC
GAACCAATTC TGGTCATTTC AGGCGATGCG CTAACCGATT TTGATTTAAC TGCCTTGATC
GAAGCCCATA AACGCTCGAA TGCCAAAGCC ACGATTACCC TCACCCGTGT GCCCAACCCG
CTGGAATATG GCGTGGTGAT CACCGATGAT ACTGGCCGAA TTCGTCAGTT CCTCGAAAAA
CCTAGTTGGG GCGAGGTTTT TTCCGATACC GTCAATACTG GAATTTATGT GATCGACCCC
TGTGTGCTTG ATGATATTCC GCTGGGCGAG CCGTTTGATT TCTCCAAAGA TTTGTTTCCT
GCCTTGTTGC GGCGCGGCGA ATTGCTTCAT GGCTATATCG CCGAGGGCTA TTGGACGGAC
GTTGGCAACA TCGAAGCCTA TATGCGAGCG TGCTCGGATT ATTTGATGGG CATGGTCAAT
TTGCCGCGCC TCGGCCATGA TCGCGGCGAT AATGTCTGGA TCGAAGGTGA GGTTGAAATT
GCCCCCGATG CCCAAATTCA TGGGCCAGTC TTTTTTGGCC ATGGGGTCAA GATCAAAGGC
GGGGCGATGG TATTCGGGCC ATCGGTCATC CGCGATTATA CCATTATCGA TTCACGTGCC
ACCATCGATC GTTCGATTAT GTGGCGCAAC TCGTATGTTG GCGAACGCGC CGAATTACGC
GGGGCGATTG TTTGTAAGCA ATGCAATATC AAAAGTCGCT CGTTGCTGTT CGAGGGCGTA
GTGGTCGCCG ATAGCACGAT CATCAACGCT GGGGCGGTGA TTCAGCCCAA CGTTAAAATT
TGGCCCTCGA AAGAAGTTGA AGAAGGCGCG ACCGTTAGTG CCTCGATTAT TTGGGGTGCG
CAAGGGCGGC GGGTGCTGTT TGGGCGCTAC GGCATTACGG GCTTGGTCAA TATCGATCTT
ACGCCAGAAT TTTGCGCCAA ACTTGGGGCG GCCTATGGGG CAATTTTGCC CAAAAATACC
ACCGTCACCA TGAATCGCGA TGCTCACTAT ACCCCACGAA TGCTCAAACG TGGCTTGATT
GCCGGCATTC CATCGGCGGG GATTAATGTT TTGGATTTGC ATTCGGTGCC AATTCCCACT
GCCCGCTATT TGACCTATGC GCTGAATGCT GCGGGTGGTA TGCATGTGCG GCTTTCGCCG
TTCGATAATC GCGTGGTCGA TATAAAATTC TTCGATCATC GCGGGCTTGA TCTGGGCAGC
GATATGGAGC GCAAGATCGA GAATACCTAC TTCCGCGAAG ATTATCGCCG CGTCTATCTC
GATGAAATTG GCCGGATCAC TGAAAACAGC GATTACAACT CGGTCTATAT CGATAAATTC
ATGGAATCGC TTGACCCACA TATTTTGCCC GAGCTAGAAG ACCCGTGGAG TATCGTAATC
GATTATGCTT CATCGAATGC TGCGCAAATT TTGGGTATCT TGCTACGGCG CTTGAATGTT
GATTTAGTTG AACTCAATGC CCAAATCGAT GAAGATCGTC TGTTCCAAAC CGCCGATCAA
TTTAATGCTG GTATGCAACG ACTGACTGCG ATCGTGCCCG TGATGAATGC AGATATTGGA
GTGCGGCTCG ATTCGGGCGG CGAACGGATT TACGTTGTCG ATGATACAGG CCATCGATTA
ACTGACATTG AATTGTTGGC GGCGGTTACC GCTTTGACCA TGGAAGCCAA CAAAGGTGGT
ACGGTGGCCG TGCCAGTCAC CGCGCCGCGT TTATTCGATA AATTGGCCGA GCGCTATGGC
GGGCGCATCC AGCGCACCAA AACCGCCTTG GGAGCGCTGA TGCAACAAGC TGCCAAATGC
AACGATTTAT GTGTCTTGGG CGATGCAGCA GGCAGCCTGA TTTTCCCATC GTTCTTTCCA
GTTGCTGATG GTCTGTTTGC AATTGTTAAA TTGATGGAAT TACTGGCCCG CGCCAAAATT
CCCCTCTCGG AGATTCGTCG TTCCTTGCCA CGCTCAGCCA TGGCTAACCA CAAAGTGCCA
TGTCGCTGGG AATCCAAGGG CAAAGTTATG CGGATTCTCA ACGAACAATA TGCCGAGCGT
GCTCAAGACA ACATCGATGG GATCAAGATT GATCTTGGGC CGGAGTGGGT GTTGATTCTG
CCCGACCCTG ATGGCCCCTT CATTCATGTG ATTGCCGAGG GAGTGAACGA TGATCAAGCC
CGCGTGCTAA CCGAAAAATA TGCTGGTTTG GTGATGGGGC TTCAGTAG
 
Protein sequence
MKAVLMAGGE GSRLRPLTIS RPKPMVPLVD RPVMGHIIEL LKRHGITDII ITVQYLANII 
QDFYGDGSAF DVDISYSVEE VPLGTAGAVK YASRLIDDDS EPILVISGDA LTDFDLTALI
EAHKRSNAKA TITLTRVPNP LEYGVVITDD TGRIRQFLEK PSWGEVFSDT VNTGIYVIDP
CVLDDIPLGE PFDFSKDLFP ALLRRGELLH GYIAEGYWTD VGNIEAYMRA CSDYLMGMVN
LPRLGHDRGD NVWIEGEVEI APDAQIHGPV FFGHGVKIKG GAMVFGPSVI RDYTIIDSRA
TIDRSIMWRN SYVGERAELR GAIVCKQCNI KSRSLLFEGV VVADSTIINA GAVIQPNVKI
WPSKEVEEGA TVSASIIWGA QGRRVLFGRY GITGLVNIDL TPEFCAKLGA AYGAILPKNT
TVTMNRDAHY TPRMLKRGLI AGIPSAGINV LDLHSVPIPT ARYLTYALNA AGGMHVRLSP
FDNRVVDIKF FDHRGLDLGS DMERKIENTY FREDYRRVYL DEIGRITENS DYNSVYIDKF
MESLDPHILP ELEDPWSIVI DYASSNAAQI LGILLRRLNV DLVELNAQID EDRLFQTADQ
FNAGMQRLTA IVPVMNADIG VRLDSGGERI YVVDDTGHRL TDIELLAAVT ALTMEANKGG
TVAVPVTAPR LFDKLAERYG GRIQRTKTAL GALMQQAAKC NDLCVLGDAA GSLIFPSFFP
VADGLFAIVK LMELLARAKI PLSEIRRSLP RSAMANHKVP CRWESKGKVM RILNEQYAER
AQDNIDGIKI DLGPEWVLIL PDPDGPFIHV IAEGVNDDQA RVLTEKYAGL VMGLQ