Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3420 |
Symbol | |
ID | 5735281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4309019 |
End bp | 4311526 |
Gene Length | 2508 bp |
Protein Length | 835 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280567 |
Product | nucleotidyl transferase |
Protein accession | YP_001546184 |
Protein GI | 159899937 |
COG category | [G] Carbohydrate transport and metabolism [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1109] Phosphomannomutase [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCAG TTTTAATGGC TGGGGGTGAA GGCTCTCGGC TCCGACCACT CACCATCAGT CGGCCCAAAC CAATGGTTCC GCTGGTCGAT CGACCAGTCA TGGGCCATAT TATTGAACTT CTGAAACGCC ACGGCATCAC CGATATTATT ATTACGGTGC AATATCTCGC CAATATTATT CAAGATTTTT ATGGCGATGG CTCGGCGTTT GATGTCGATA TTTCGTATTC GGTTGAGGAA GTGCCACTCG GCACGGCTGG TGCAGTTAAA TATGCTTCAC GCTTGATCGA TGATGATAGC GAACCAATTC TGGTCATTTC AGGCGATGCG CTAACCGATT TTGATTTAAC TGCCTTGATC GAAGCCCATA AACGCTCGAA TGCCAAAGCC ACGATTACCC TCACCCGTGT GCCCAACCCG CTGGAATATG GCGTGGTGAT CACCGATGAT ACTGGCCGAA TTCGTCAGTT CCTCGAAAAA CCTAGTTGGG GCGAGGTTTT TTCCGATACC GTCAATACTG GAATTTATGT GATCGACCCC TGTGTGCTTG ATGATATTCC GCTGGGCGAG CCGTTTGATT TCTCCAAAGA TTTGTTTCCT GCCTTGTTGC GGCGCGGCGA ATTGCTTCAT GGCTATATCG CCGAGGGCTA TTGGACGGAC GTTGGCAACA TCGAAGCCTA TATGCGAGCG TGCTCGGATT ATTTGATGGG CATGGTCAAT TTGCCGCGCC TCGGCCATGA TCGCGGCGAT AATGTCTGGA TCGAAGGTGA GGTTGAAATT GCCCCCGATG CCCAAATTCA TGGGCCAGTC TTTTTTGGCC ATGGGGTCAA GATCAAAGGC GGGGCGATGG TATTCGGGCC ATCGGTCATC CGCGATTATA CCATTATCGA TTCACGTGCC ACCATCGATC GTTCGATTAT GTGGCGCAAC TCGTATGTTG GCGAACGCGC CGAATTACGC GGGGCGATTG TTTGTAAGCA ATGCAATATC AAAAGTCGCT CGTTGCTGTT CGAGGGCGTA GTGGTCGCCG ATAGCACGAT CATCAACGCT GGGGCGGTGA TTCAGCCCAA CGTTAAAATT TGGCCCTCGA AAGAAGTTGA AGAAGGCGCG ACCGTTAGTG CCTCGATTAT TTGGGGTGCG CAAGGGCGGC GGGTGCTGTT TGGGCGCTAC GGCATTACGG GCTTGGTCAA TATCGATCTT ACGCCAGAAT TTTGCGCCAA ACTTGGGGCG GCCTATGGGG CAATTTTGCC CAAAAATACC ACCGTCACCA TGAATCGCGA TGCTCACTAT ACCCCACGAA TGCTCAAACG TGGCTTGATT GCCGGCATTC CATCGGCGGG GATTAATGTT TTGGATTTGC ATTCGGTGCC AATTCCCACT GCCCGCTATT TGACCTATGC GCTGAATGCT GCGGGTGGTA TGCATGTGCG GCTTTCGCCG TTCGATAATC GCGTGGTCGA TATAAAATTC TTCGATCATC GCGGGCTTGA TCTGGGCAGC GATATGGAGC GCAAGATCGA GAATACCTAC TTCCGCGAAG ATTATCGCCG CGTCTATCTC GATGAAATTG GCCGGATCAC TGAAAACAGC GATTACAACT CGGTCTATAT CGATAAATTC ATGGAATCGC TTGACCCACA TATTTTGCCC GAGCTAGAAG ACCCGTGGAG TATCGTAATC GATTATGCTT CATCGAATGC TGCGCAAATT TTGGGTATCT TGCTACGGCG CTTGAATGTT GATTTAGTTG AACTCAATGC CCAAATCGAT GAAGATCGTC TGTTCCAAAC CGCCGATCAA TTTAATGCTG GTATGCAACG ACTGACTGCG ATCGTGCCCG TGATGAATGC AGATATTGGA GTGCGGCTCG ATTCGGGCGG CGAACGGATT TACGTTGTCG ATGATACAGG CCATCGATTA ACTGACATTG AATTGTTGGC GGCGGTTACC GCTTTGACCA TGGAAGCCAA CAAAGGTGGT ACGGTGGCCG TGCCAGTCAC CGCGCCGCGT TTATTCGATA AATTGGCCGA GCGCTATGGC GGGCGCATCC AGCGCACCAA AACCGCCTTG GGAGCGCTGA TGCAACAAGC TGCCAAATGC AACGATTTAT GTGTCTTGGG CGATGCAGCA GGCAGCCTGA TTTTCCCATC GTTCTTTCCA GTTGCTGATG GTCTGTTTGC AATTGTTAAA TTGATGGAAT TACTGGCCCG CGCCAAAATT CCCCTCTCGG AGATTCGTCG TTCCTTGCCA CGCTCAGCCA TGGCTAACCA CAAAGTGCCA TGTCGCTGGG AATCCAAGGG CAAAGTTATG CGGATTCTCA ACGAACAATA TGCCGAGCGT GCTCAAGACA ACATCGATGG GATCAAGATT GATCTTGGGC CGGAGTGGGT GTTGATTCTG CCCGACCCTG ATGGCCCCTT CATTCATGTG ATTGCCGAGG GAGTGAACGA TGATCAAGCC CGCGTGCTAA CCGAAAAATA TGCTGGTTTG GTGATGGGGC TTCAGTAG
|
Protein sequence | MKAVLMAGGE GSRLRPLTIS RPKPMVPLVD RPVMGHIIEL LKRHGITDII ITVQYLANII QDFYGDGSAF DVDISYSVEE VPLGTAGAVK YASRLIDDDS EPILVISGDA LTDFDLTALI EAHKRSNAKA TITLTRVPNP LEYGVVITDD TGRIRQFLEK PSWGEVFSDT VNTGIYVIDP CVLDDIPLGE PFDFSKDLFP ALLRRGELLH GYIAEGYWTD VGNIEAYMRA CSDYLMGMVN LPRLGHDRGD NVWIEGEVEI APDAQIHGPV FFGHGVKIKG GAMVFGPSVI RDYTIIDSRA TIDRSIMWRN SYVGERAELR GAIVCKQCNI KSRSLLFEGV VVADSTIINA GAVIQPNVKI WPSKEVEEGA TVSASIIWGA QGRRVLFGRY GITGLVNIDL TPEFCAKLGA AYGAILPKNT TVTMNRDAHY TPRMLKRGLI AGIPSAGINV LDLHSVPIPT ARYLTYALNA AGGMHVRLSP FDNRVVDIKF FDHRGLDLGS DMERKIENTY FREDYRRVYL DEIGRITENS DYNSVYIDKF MESLDPHILP ELEDPWSIVI DYASSNAAQI LGILLRRLNV DLVELNAQID EDRLFQTADQ FNAGMQRLTA IVPVMNADIG VRLDSGGERI YVVDDTGHRL TDIELLAAVT ALTMEANKGG TVAVPVTAPR LFDKLAERYG GRIQRTKTAL GALMQQAAKC NDLCVLGDAA GSLIFPSFFP VADGLFAIVK LMELLARAKI PLSEIRRSLP RSAMANHKVP CRWESKGKVM RILNEQYAER AQDNIDGIKI DLGPEWVLIL PDPDGPFIHV IAEGVNDDQA RVLTEKYAGL VMGLQ
|
| |