Gene Haur_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3416 
Symbol 
ID5735277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4303004 
End bp4303807 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content53% 
IMG OID641280563 
Producthypothetical protein 
Protein accessionYP_001546180 
Protein GI159899933 
COG category[S] Function unknown 
COG ID[COG1624] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00159] conserved hypothetical protein TIGR00159 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAAGCT TCCAGCAGAT TTGGGAACGA GTTTCTTTCT TAGCAGCTCT AGATATTCTG 
CTTGTTGCTG CCTTGATTTT TTGGCTGCTC GGGGTCATTC GTGGCACTCG CGCAGTGCAA
TTATTGCGCG GGGTCGGCAT TTTAGTCGTC GTTGCACTAC TAGCTGGCTC AACCTTGCCG
CTTACCACAT TGCGCTGGAT CATTCGCGAA GCCCTCAGCC CAGCCCTATT CGTCGCAATT
CCGATTCTGT TTCAGCCGGA ATTACGCCGT GCGCTCGAAT CGTTGGGCCG CACTGGCGAA
TGGTTTAATC GCTTTGGCAG CACTAATCGC TCCGATGTTG AGGAGATGAT CAACACCATT
TCGCGGGCAG CCAAACAATT ATCACAACAA GGCATTGGCG CATTAATGGT GATCGAGCGT
GATACCGGCT TGCAAGAATA TGCCGACCGT GGCGTGATCG TCGATTCGCG CATCTCCGTG
CCCTTGCTGG TGAATATTTT CTTCCCCAAC GCGCCACTCC ACGATATGGC GGTGATTTTT
CGGCGCAACC GCATTTTGGC CGCCAACTGT GTGCTACCAC TCAGCGAAAA TGTGGTTGGC
AGCACGCGCT ATGGCACGCG CCACCGTGCC GCTTTGGGCA TCAGCGAACA ATCTGATGCA
ATTTCGGTGA TCGTTTCCGA AGAAACTGGC AGCATTTCGA TTACCCACGA TGGCCGCATG
GTGCGCCATT TAACTGAAGG TCGTTTACGC AAACTGCTGG CTGGCTTATT GCGCGTCGAA
TTAAGCGAGG AAGAAGAAGT ATGA
 
Protein sequence
MPSFQQIWER VSFLAALDIL LVAALIFWLL GVIRGTRAVQ LLRGVGILVV VALLAGSTLP 
LTTLRWIIRE ALSPALFVAI PILFQPELRR ALESLGRTGE WFNRFGSTNR SDVEEMINTI
SRAAKQLSQQ GIGALMVIER DTGLQEYADR GVIVDSRISV PLLVNIFFPN APLHDMAVIF
RRNRILAANC VLPLSENVVG STRYGTRHRA ALGISEQSDA ISVIVSEETG SISITHDGRM
VRHLTEGRLR KLLAGLLRVE LSEEEEV