| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3396 |
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| Symbol | |
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| ID | 5735257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4278197 |
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| End bp | 4279354 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641280543 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001546160 |
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| Protein GI | 159899913 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000848869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGC TGACCCGTTG TTACAAATAC CGTCTGCAAC TCACACCGAC CCACGTTGAA
ACCTTGGTAC AGTGGGCGGG TTGTCGGCGC TTCGTCTGGA ATTGGGCGCT GCACTGCAAG
CAAACCCACT ACCAAACAAC GGGTCAACGG CTGAGCTATC AACGGCTTGC GGCGGCATTG
GTTGATCTGA AACGTCAGCC CAAAACGGCA TTTTTGCGTG ATTGCCACTC ACAACCGTTG
CAACAAACCT TGATGGATTT GGAAACGGCC TTCAGCAACT TTTTTGCCAA ACGCGCCAAG
TACCCGCGAT TCAAATCACG CAAAATCACG CCGCACAGCC TACGCTTCCC GCAAGGTGTG
ATCGTGGTTG ATGAACATAC CATCAGCGTG CCAAAAATCG GGCTGATACG GGCGATCATT
CATCGCCCCT TGCAAGGCAT AGCGAAGAGT GCAACGATCA AACAGGATGC CACAGGCGCG
TGGTGGGTCA TTTTCGTCTG TCATATCGAC CTCCCTGATG TTCAACCAAC AGCTGATCGA
CCTGTGGGCA TTGATGTCGG GCTTGAATCC TTCACCACGC TGTCAACGGG CGAGAAGACA
GCACCACCAA AGTTCTACTG TCGAAGCCAA AAGAAACTTG CCCGTGCTCA GCGCAAACTC
TCACGCGCCC AAAAGGGCAG CAACAACCGC TTGAAAGCAA AAAAGCACGT TGCCCGTATC
CACAAGAAAA TCAACAACCA ACGTGCCGAT TGGCTGCATA AGCATGCGTT GGGGATAGTT
CGCCAATTTG ACGTGGTGTG CATCGAAGAC CTGAATATTA AAGGCCTTGC GAGAACCAAG
CTGGCCAAAT CATTCAGTGA TGCCGCACTG AGTACCTTCA TGCAACGATT GCAGGAAAAA
GCTGAATGGC ACGGACGACG AGTTGTTAAG ATTGGGCGGT TCTACGCCTC ATCGAAAACT
TGCCACTTCT GTCATTCCAA GACTGCCTTG ACGCTGGCTG ACCGCGTGTG GACATGCCCC
ACCTGTGGCA CGACCCATGA TCGCGATGGC AACGCCGCGA TCAACATGCT GTATGAAGGG
CTACGCCTGC TTGCCGTTGG GACGACGGAA AGCCAAAACG CTGCTCGAGA TGGTGTAAAC
CCAGCGAAAC GCTGGTAG
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| Protein sequence | MRMLTRCYKY RLQLTPTHVE TLVQWAGCRR FVWNWALHCK QTHYQTTGQR LSYQRLAAAL
VDLKRQPKTA FLRDCHSQPL QQTLMDLETA FSNFFAKRAK YPRFKSRKIT PHSLRFPQGV
IVVDEHTISV PKIGLIRAII HRPLQGIAKS ATIKQDATGA WWVIFVCHID LPDVQPTADR
PVGIDVGLES FTTLSTGEKT APPKFYCRSQ KKLARAQRKL SRAQKGSNNR LKAKKHVARI
HKKINNQRAD WLHKHALGIV RQFDVVCIED LNIKGLARTK LAKSFSDAAL STFMQRLQEK
AEWHGRRVVK IGRFYASSKT CHFCHSKTAL TLADRVWTCP TCGTTHDRDG NAAINMLYEG
LRLLAVGTTE SQNAARDGVN PAKRW
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