| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3371 |
|---|
| Symbol | panB |
|---|
| ID | 5735232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4251201 |
|---|
| End bp | 4252067 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641280518 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_001546135 |
|---|
| Protein GI | 159899888 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.520151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACAC AATTGAGCGA TATTCAACGG ATGAAAGATC GGGGCGAACG CTTGGTGATG
GTTACGGCCT ACGATTACAC CAGTGCCCAA CTGGTCGATC GCACCGATAT TCCCTTAATT
TTGGTTGGCG ATTCGCTGGG GATGGTGATT CAGGGCAATA GTTCAACTGT GCCAGTAACG
ATCGATGAAA TGGTTTATCA CACCAAAGCT GTGATGCGGG GCAGCAGCAA AGCCCTAGTT
GTTGGCGATT TGCCATTTTT GAGCTACACC AGCCCTGAAC AGGCCATCCA AAATGCTGGC
AAATTGATGC AAATTGGTGG TTGTGGCGCG GTAAAGCTCG AAGGTGGCGT GAATCTGGCT
CCCACCGTGC GCCGCTTGGT CGATTTGGGC ATTCCGGTGA TGGGCCATTT GGGTTTTACC
CCACAATCAG TTAATCAAAT TGGCATGCGG GTGCAGGGCA AAACCGTGGC CCATGCCCGT
CAGTTGCTTG ACGATGCCTT GGCGCTTGAA GCGGCTGGAG CCTTTGCGAT TGTGTTGGAG
TTAATTCCAG CAGCCTTGGC CAAGGCGATC ACGGCTCGCT TGCATATTCC GACGATTGGC
ATTGGGGCGG GGGTCGGTTG TGATGGCGAA GTGCAAGTTT GGCACGATAT TTTGGGCTTG
TATAGCGATC ATCTGCCGCG CCACACCAAA CGCTATGCCG ATTTGGGCAG CACAATTGAG
CAAGCGCTGA CGCAATATGC CCACGAAGTC CGCGAACGCA GTTTCCCAAC TGCCGCTAAT
AGTAGCGTAA TTGATGCCAA TACCTTGGCC GAAGCGCTGG GCGAACAAAC CGTCAGCGTT
GGAGCAAGTG CCAAAGTCGC TGTCTAA
|
|---|
| Protein sequence | MRTQLSDIQR MKDRGERLVM VTAYDYTSAQ LVDRTDIPLI LVGDSLGMVI QGNSSTVPVT
IDEMVYHTKA VMRGSSKALV VGDLPFLSYT SPEQAIQNAG KLMQIGGCGA VKLEGGVNLA
PTVRRLVDLG IPVMGHLGFT PQSVNQIGMR VQGKTVAHAR QLLDDALALE AAGAFAIVLE
LIPAALAKAI TARLHIPTIG IGAGVGCDGE VQVWHDILGL YSDHLPRHTK RYADLGSTIE
QALTQYAHEV RERSFPTAAN SSVIDANTLA EALGEQTVSV GASAKVAV
|
|---|
| |