Gene Haur_3363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3363 
Symbol 
ID5736905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4241084 
End bp4241998 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content48% 
IMG OID641280510 
Producthypothetical protein 
Protein accessionYP_001546127 
Protein GI159899880 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.298579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTGC GGCAAACGGG CGTTCTCTTA ATTTTGGCCT TAGTCTGGGG AGCATCATTT 
TTATTCATTC GACTGGGCGT AGAAACCATT CCACCAATTA CCTTTGTGTT TTTGCGTTTG
GCGATTGCTG CGGTGTTAAT TTATGCTGTG TTGCGCTGGC AAAAAGTTCA GCTACCGCGT
GAGCGCAAAC TATGGTATTC ACTGGGTTTT GTTGGTTTCG TGAATGCAGC TCTGCCGTAC
TGTTTGTTTG CATGGGGCGA ACACAAAATG GGTACTAACG CCAGCGGCTT GGCTTCGATC
TATAATGCGA CAACACCCTT GTGGACAGTG ATTTTAGCTT TTGCCTTTGT GCGTTCCGAG
CGTTTGACGG GCGTGCGTAC CTTTGGCATT GTCTTGGGTT TTGCGGGCGT GGTCTATCTC
TTTTCACGTT CGATTGGCAA TATCAATAGC TTGGATACGT GGGGCCAAAT TGCCTGTATC
ATTGCCTCAT CGATGTATGG AATTGGTACG CTGTATGTGC GCCGCAACTT TGGCAGCCTG
CCAGCGCTGA TTCCCGCCTT TGGTCAAATG GCAAGTGGCG CGATTATGCT TTTGCCAGTT
GCGCTCGTGG TTGATCATAA TAGTTGGCAA ATGCCAAGTT TGGTTTCGCT TGGCTCACTG
TTTGGTTTAG CCATTTTAGG CACAGGCATT GCCCAAATTC TCTACTTTTG GTTGGTAAAG
CAGGTTGGCG CGGCGCGAAC CGCCCAAGTT ACCTATATTT TGCCAATCTT CGCGATTTTT
TGGGGCTGGC TGTTTTTGAA TGAAGCCATT CGCAGCGATA TGCTGATTGG CCTCTGTTTG
ATTTTGCTGG GCGTGATTAT TGTCAATGGC AAATGGCCAT TTCGTCGTCA GACCGTTGCC
GCACCCAGTA ACTAA
 
Protein sequence
MTLRQTGVLL ILALVWGASF LFIRLGVETI PPITFVFLRL AIAAVLIYAV LRWQKVQLPR 
ERKLWYSLGF VGFVNAALPY CLFAWGEHKM GTNASGLASI YNATTPLWTV ILAFAFVRSE
RLTGVRTFGI VLGFAGVVYL FSRSIGNINS LDTWGQIACI IASSMYGIGT LYVRRNFGSL
PALIPAFGQM ASGAIMLLPV ALVVDHNSWQ MPSLVSLGSL FGLAILGTGI AQILYFWLVK
QVGAARTAQV TYILPIFAIF WGWLFLNEAI RSDMLIGLCL ILLGVIIVNG KWPFRRQTVA
APSN