Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3340 |
Symbol | |
ID | 5735210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 4210619 |
End bp | 4212292 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641280487 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001546104 |
Protein GI | 159899857 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAA GCGTCGCAAT GACTGAGCAG CCTAGTCAAA CAGCTGCGAT AACTCTCCCA CGTTCGCCCT TAAGTCGGTT GTTGTTGCCA ATTGCCTTGG TGGTGTTGGC GCTTGGTGCT GGGCTGGCAG CGTGGAGCGG ATTTAATTTT GGCCCACAAA CGATGCTGAT CGGGGCGATT GCAGGCGGAG TTGGCGCACT GGCCGCTTTG GTTGGCCTGA TTGCTGGCTT GCGTCGGCGC TTGCCCTTGA GTGGTTGGGC CTTGATTGTG GGTACGCTCA GCATCGCTTT GGGTGCAACC ATGGTCTTCC CTGAACAACG CGAATTGGCG ATTATCAGCG CCGCCCTGCC GGTTTTGTGT GCCGCGCTGA CCTTGCGCCC CTTGCACACT GCTATTGTTA CGGTTGTTAG TTTAGCGAGT TTATGGGCGG CGGCCTATTT TGCTGCCGCC GAGCCAAGCA CTAATCAGTT AATTCAATGG AGCTTGCTCA GTGCCTTTGT GCTCGTGATC AGCATTTTTG CCTTGGTTTG TAGCGCAGCG CTCCGTGCTT TTGATCGCCA GCAAACTGTC GGACATGAAT CAACCACCCA ACTCAATAAG CAACTTGGCG AAGAGCAAGA ACGGGTCGAA CGCGCCGCCC AATTGTTGGT GCAAGAGCGT GATCGACTGG CGGCGGTGCT GGGCGCAGCG AGCGATGGCG TGGTGTTGGC CGATAGCAAT GGCATCATTT TGCAGGCCAA TGCTGCTGCC CGCCAACTGT TGAATGAAGC GTTTGGCGGC ACGCTCGAAG GCCAAGCACT CAACCAGTGG AGCCAAGAAA ACACGGGCCG TTTGCGGGTA ATTAGCAACG AACGCGAAGG CGAACGCCAA CGGGTGGTTT TTGAGCAACA ACAAGGCACG CGCAAACCCG TAATTGGCCT TAACCAAGTG CCAATTCGCA GTAGCGCCGG CAGTGTCTTG GGCTATGTTG GGGTTTTCCA CGATAAAACC ACCGAATTAG AAGTTGAAGA AATGCGTTCG CAATTACTCG ATTTCCTCGT GCAAGATATG CATGATCCGC TCAACTCGGT GTTGGCAGCC CAAGATACCT TGTTGGCTGG CGATTTAGGC GATGGCAATG AGCGGGTTTT ATCGACCGCC CGCCGCACAA CCTCGCGCTT GGTTGAGCTA ACCAATACCT TGATGGAAAT GAGCCGTTTG CATGGCGACC CCAATAGCCT GCATCGTTTG GCCAACCCAT TGCGCCCATT GATCGAAGGC AGCATCGCCC AATCAACACC ACAAGCCCAA CAACGGGCAA TCAACTTGGT GTTGGAGTAT GGCGCAGATA GTGGTGGCCT CGCCTTCGAT GCTGATAAGA TGCGGCGGGT GATGAGCCAC TTGCTTGATA ATGCTTTGCG TCGCAGCCCA GCCTATAGCA CGGTGCGGGT GCAAGTGAGC AACACGGGCG GAAATGCCCA AGTACGGATC GCCGACCAAG GCCCAAGTAT TCCGGTGGAA CTCGCAGGCC GCATTTTTGA TCGCTTCAGC AAACAGGTTG GCGAACAACG GATCGGCGGG GTTGGCCTAG CCTATTGCAA ACAGGTGATT GAGGCTCATG GTGGCCGAAT TTGGGTCGAT AGCACGCCTG GCAAAGGCAG TACCTTTATC TTTAGCATGC CCTCAGCAGC ATAA
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Protein sequence | MTESVAMTEQ PSQTAAITLP RSPLSRLLLP IALVVLALGA GLAAWSGFNF GPQTMLIGAI AGGVGALAAL VGLIAGLRRR LPLSGWALIV GTLSIALGAT MVFPEQRELA IISAALPVLC AALTLRPLHT AIVTVVSLAS LWAAAYFAAA EPSTNQLIQW SLLSAFVLVI SIFALVCSAA LRAFDRQQTV GHESTTQLNK QLGEEQERVE RAAQLLVQER DRLAAVLGAA SDGVVLADSN GIILQANAAA RQLLNEAFGG TLEGQALNQW SQENTGRLRV ISNEREGERQ RVVFEQQQGT RKPVIGLNQV PIRSSAGSVL GYVGVFHDKT TELEVEEMRS QLLDFLVQDM HDPLNSVLAA QDTLLAGDLG DGNERVLSTA RRTTSRLVEL TNTLMEMSRL HGDPNSLHRL ANPLRPLIEG SIAQSTPQAQ QRAINLVLEY GADSGGLAFD ADKMRRVMSH LLDNALRRSP AYSTVRVQVS NTGGNAQVRI ADQGPSIPVE LAGRIFDRFS KQVGEQRIGG VGLAYCKQVI EAHGGRIWVD STPGKGSTFI FSMPSAA
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