Gene Haur_3275 details

Gene Information

• Locus tag: Haur_3275
• Symbol: rpsL
• ID: 5735143
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 4139902
• End bp: 4140342
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641280421
• Product: 30S ribosomal protein S12
• Protein accession: YP_001546040
• Protein GI: 159899793
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0048] Ribosomal protein S12
• TIGRFAM ID: [TIGR00981] ribosomal protein S12, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000846161
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAACGA TCAACCAGTT GATCCGCAAG CCCCGTAAAC CTGTGGTCAA AAAGACCAAG 
GCACCTGCGC TGCGTTTCAT CTACAACTCG CTGAAGGGCA AGCTTACCCG CGGCAACGGT 
GCACCCCAAA AGCGTGGTGT TTGTACCCAA GTTAAGACCA TGACCCCTAA GAAGCCAAAC 
TCGGCATTGC GTAAAGTGGC TCGGGTGCGC TTGTCGAATC AAATGGAAGT GACCGCGTAT 
ATTCCAGGCG AAGGTCACAA CTTGCAAGAA CACTCAGTGG TCTTGATTCG CGGTGGTCGG 
GTAAAAGACT TGCCAGGCGT GCGCTACCAC ATTGTGCGCG GTACCTTGGA CTCACAAGGT 
GTCAACAACC GCAAGCAAGG TCGCTCGAAG TACGGCACCA AGAAGAATGC CCAAGTTGCA 
ACGGGCAAGA AGAAAAAATA A 

 

Protein sequence

MPTINQLIRK PRKPVVKKTK APALRFIYNS LKGKLTRGNG APQKRGVCTQ VKTMTPKKPN 
SALRKVARVR LSNQMEVTAY IPGEGHNLQE HSVVLIRGGR VKDLPGVRYH IVRGTLDSQG 
VNNRKQGRSK YGTKKNAQVA TGKKKK