Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3266 |
Symbol | |
ID | 5735134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 4129558 |
End bp | 4130403 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641280412 |
Product | ABC-2 type transporter |
Protein accession | YP_001546031 |
Protein GI | 159899784 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATTTG GGCGTTCGTT TTGGCGCGAA ACTCGCGCAT CGTATGCATT TGTTGAGCGC AATATCAACT TAATCAAACG CTATTGGGGT TGGGAAGTTG TTTGGTTAAT CTATTCGATT GTCAATGCCT TATCGATTAC CTTTATTGGT AAGGCGGTTG GGGCGATTAC CGGCCAAGAA TTCGACCAAG CAACAATCAA TGCCACAATT TTATATCTGA TTGTCGGGAC ATTGGTTTGG CACTATTTGG CGGTGGTCTT TGATTGTATT GCTGAATCGG TGCAGTGGGA GCGTTGGGAA GGCACAATTG AATATACCTT TATGGCTCCG ATTTCGCGCC TGACCCACAT GCTGGGCACA ACAATTTTTG CAATCTTCTG GGGCTTGTTT CATACAGGGA TTATTTTGGC CTTTGTGGCG GTGTTTTTTC AAATTAGCCT TGAGAATGCC AACTTCTTGG GTGCAACCGT CATCTTGCTG ACGGGCAGTA TCAGCTTTAT AGGCTTAGGG ATTGTGGCAG CGGTTTTGCC ATTACTCTTT CCCGAACGTG GAGCGCAGAT GACGAACATC GTCAAAGCCA CAATTTTGTT GGTTTCAGGT GTGTACTACC CAATTAGCGT ATTGCCAACC TGGATGCAAC CACTGGCCTC GGTCTCGCCA GCGACCTATG TGTTGGAAGG CATGCGGCGG GCTTTGCAAA ATAATGCTGG GCCGCTCGAC CTCTGGGCCA GCTACCTGTT GCCATTGTTG GGCAGTGGTT TGCTACTTGT TCCCTTTGGC TTGTGGATTT TCTTGCGGGG CGAGGAATAT GCCAAACGCA CAGGCCGCCT AAAACGCAAC GGCTAA
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Protein sequence | MAFGRSFWRE TRASYAFVER NINLIKRYWG WEVVWLIYSI VNALSITFIG KAVGAITGQE FDQATINATI LYLIVGTLVW HYLAVVFDCI AESVQWERWE GTIEYTFMAP ISRLTHMLGT TIFAIFWGLF HTGIILAFVA VFFQISLENA NFLGATVILL TGSISFIGLG IVAAVLPLLF PERGAQMTNI VKATILLVSG VYYPISVLPT WMQPLASVSP ATYVLEGMRR ALQNNAGPLD LWASYLLPLL GSGLLLVPFG LWIFLRGEEY AKRTGRLKRN G
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