Gene Haur_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3266 
Symbol 
ID5735134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4129558 
End bp4130403 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content49% 
IMG OID641280412 
ProductABC-2 type transporter 
Protein accessionYP_001546031 
Protein GI159899784 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTG GGCGTTCGTT TTGGCGCGAA ACTCGCGCAT CGTATGCATT TGTTGAGCGC 
AATATCAACT TAATCAAACG CTATTGGGGT TGGGAAGTTG TTTGGTTAAT CTATTCGATT
GTCAATGCCT TATCGATTAC CTTTATTGGT AAGGCGGTTG GGGCGATTAC CGGCCAAGAA
TTCGACCAAG CAACAATCAA TGCCACAATT TTATATCTGA TTGTCGGGAC ATTGGTTTGG
CACTATTTGG CGGTGGTCTT TGATTGTATT GCTGAATCGG TGCAGTGGGA GCGTTGGGAA
GGCACAATTG AATATACCTT TATGGCTCCG ATTTCGCGCC TGACCCACAT GCTGGGCACA
ACAATTTTTG CAATCTTCTG GGGCTTGTTT CATACAGGGA TTATTTTGGC CTTTGTGGCG
GTGTTTTTTC AAATTAGCCT TGAGAATGCC AACTTCTTGG GTGCAACCGT CATCTTGCTG
ACGGGCAGTA TCAGCTTTAT AGGCTTAGGG ATTGTGGCAG CGGTTTTGCC ATTACTCTTT
CCCGAACGTG GAGCGCAGAT GACGAACATC GTCAAAGCCA CAATTTTGTT GGTTTCAGGT
GTGTACTACC CAATTAGCGT ATTGCCAACC TGGATGCAAC CACTGGCCTC GGTCTCGCCA
GCGACCTATG TGTTGGAAGG CATGCGGCGG GCTTTGCAAA ATAATGCTGG GCCGCTCGAC
CTCTGGGCCA GCTACCTGTT GCCATTGTTG GGCAGTGGTT TGCTACTTGT TCCCTTTGGC
TTGTGGATTT TCTTGCGGGG CGAGGAATAT GCCAAACGCA CAGGCCGCCT AAAACGCAAC
GGCTAA
 
Protein sequence
MAFGRSFWRE TRASYAFVER NINLIKRYWG WEVVWLIYSI VNALSITFIG KAVGAITGQE 
FDQATINATI LYLIVGTLVW HYLAVVFDCI AESVQWERWE GTIEYTFMAP ISRLTHMLGT
TIFAIFWGLF HTGIILAFVA VFFQISLENA NFLGATVILL TGSISFIGLG IVAAVLPLLF
PERGAQMTNI VKATILLVSG VYYPISVLPT WMQPLASVSP ATYVLEGMRR ALQNNAGPLD
LWASYLLPLL GSGLLLVPFG LWIFLRGEEY AKRTGRLKRN G