Gene Haur_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3189 
Symbol 
ID5735064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4034303 
End bp4035208 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content52% 
IMG OID641280335 
Productcitrate (pro-3S)-lyase 
Protein accessionYP_001545954 
Protein GI159899707 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0128752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCAA GGATTCGCCG CAGTGAAATG ACCTGCCCCG CCCATAGCCT AGCCATGATC 
ACCAAAGCCG CCGCCTCTGA GGCCGACGAA GTGATTATCG ATTTAGAAGA TGCTTGCGCC
GTTTCACAGA AAATTGCCGC CCGTGCCACA GTCATTCAAG CCTTGCAAAG CTTAGATTTT
GGCCAGAAAA TTGTAGCAGT GCGCCCAAAT GCGGTGCAAA CTCATTATCA CTATCGCGAT
GTCGTTGAAA TTGTCGAGGC GGCTGGCGCT AAAATTGATG TTTTGGTGAT TCCCAAAATT
GAAAGCGCTG ACGATGTGCG CTTCGTTGAT CGGTTGCTCA GTCAAATCGA GGCCAATATT
GGCTTGCAGG TTGGCACAAT TAAGCTCGAA GTATTAATTG AAGGCACTCG CGCCTTGCAA
GCGGTTGAGC AGATTGCCAA CGCCTCGCCT CGTTTGGAAA GCTTAATTTT TGGTTTGGCG
GATTATGCAG GCGATTTGGG AGCACGCTCG GCAGATGATC AATGGGGCAT GTTTGCTTAC
CCCAAGCACA AAATGTTGGT AGCGGCCAAA GCGGCGGGCC TAGAGGCGAT CGATAATGTG
ACCTTTGCCT TTCGCGATGC CGAGGCCTGC CAACGCGATG CAGAACGCGC TGCCGCGATG
GGTTTCGATG GCAAATGGGC AATTCATCCG GTACAAGTGC CAATCATCAA CCAAGCCTTT
TTGCCCAGCG CTGCCGAAAT TGCCGAAGCT CAACGCCTGA TCAAGGCCTA CCAAGCTGCC
GATCAACAGG CAGGCTTAGG GGCAATTGCG ATTGATGATC AGATGATCGA TGCAGCAAGC
TTGCGGGTTC ATGCCAAAAA ATTAGCTATG GCGCAACGGG CAGGGTTAAT CGCCATTCAG
CCTTAG
 
Protein sequence
MSSRIRRSEM TCPAHSLAMI TKAAASEADE VIIDLEDACA VSQKIAARAT VIQALQSLDF 
GQKIVAVRPN AVQTHYHYRD VVEIVEAAGA KIDVLVIPKI ESADDVRFVD RLLSQIEANI
GLQVGTIKLE VLIEGTRALQ AVEQIANASP RLESLIFGLA DYAGDLGARS ADDQWGMFAY
PKHKMLVAAK AAGLEAIDNV TFAFRDAEAC QRDAERAAAM GFDGKWAIHP VQVPIINQAF
LPSAAEIAEA QRLIKAYQAA DQQAGLGAIA IDDQMIDAAS LRVHAKKLAM AQRAGLIAIQ
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