Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3142 |
Symbol | |
ID | 5735014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3969829 |
End bp | 3970518 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641280285 |
Product | cytidylate kinase |
Protein accession | YP_001545907 |
Protein GI | 159899660 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00253738 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTTTCA CTATGACTAC ACCACATACA ATTGCAATTG ATGGCCCTGC AGCGTCGGGG AAAAGTACGC TCGGCAAGTT GTTAGCAGAT CATTTTGGCT ATATCTATTT TGATACGGGG GTGCTCTATC GCGCCTTGAC CTATGTAGCC CTCGAACAAG CCGTTGATCT CGCTGATGCC GCCGCTCTCG CCAAACTCGC CCAAACCAGC AACTTCGAAG TGCTTCCGCC AACCATCGCC GATGGCCGTC AATACACAGT GTTGGCCAAT GGCGAGGATA TTACTTGGCC ATTACGCGCC GCCAATGTTG AACGCAATGT TTCGCAAGTC GCCGCTCAAT CAGCAGTTCG CGAGGCACTT CGCGATATTC AACGCCAAAT TGGCAAAGCT GGCCATGTCG TGATGGCTGG CCGGGATATT GGGGCAGTCA TTCTGCCCGA TGCCCAGTTG AAAATTTATC TTGATGCCTC GGTTGAGGAG CGTGCCCAAC GCCGCGCCCA AGAACTCAAC GCCCGTGGCC GCTCGATCAG CTACCGCGAG GTGCTTGACG ACTTGACTCG GCGCGATGCC AAAGATGCCG CCAATACCTT CTTAGCCGCT GACGCGATTA CCATCACTAC CGATGGCCGC TCGCCCGAAG AGGTGTTTCA GGCAATTTTG GGGTTAATCG GGGTTGAAGC CCAAGCTTAA
|
Protein sequence | MFFTMTTPHT IAIDGPAASG KSTLGKLLAD HFGYIYFDTG VLYRALTYVA LEQAVDLADA AALAKLAQTS NFEVLPPTIA DGRQYTVLAN GEDITWPLRA ANVERNVSQV AAQSAVREAL RDIQRQIGKA GHVVMAGRDI GAVILPDAQL KIYLDASVEE RAQRRAQELN ARGRSISYRE VLDDLTRRDA KDAANTFLAA DAITITTDGR SPEEVFQAIL GLIGVEAQA
|
| |