| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3111 |
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| Symbol | |
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| ID | 5734983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3924733 |
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| End bp | 3926151 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641280255 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001545877 |
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| Protein GI | 159899630 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000358486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAT TCCAGCCCAC CTCGGGCGGT AGCTCAACAT CATCAGCAAA GCTATGGGTG
GTGTTGAGTG GGATTGTTGG AGTCTTGTTG GTGGTCGCGA TTGCCCTTGG GGCTGGCTAT
TATTGGGGTA GCTCATCGAA AGAGCAGACG ATGACGGCGG CGAATCAAGC TTTAGCCACC
GAAACCGCCC AAATTATGCA AGCAACCCAA CAGGCGCTGC CCCCAGCCAA TGCCGATGAA
AACTTTCAAA CCTTTTGGGA AGTTTGGAAT CTGGTCAACA AAGAGTTTTA TCACACCGAG
CCAATCGACG AAAAACAAAT GATGTATGGC GCAATTCGCG GCATGCTCCA ATCGCTTGGC
GATGATTTTA CTGGGTTCCA AGAACCCGAA GCCGCCGAAC GCTCGCGCGA GGATATGCGC
GGCAATTTCG AGGGCATCGG AGCCTATGTC GAGTATAAAG ATGGCCAGAT CCTAATTGTT
TCGCCAATTG AGGGTTCGCC TGCTGAAAAA GCCAATGTGC GAGCTGGCGA TATTGTGGTC
GCGGTCGATG GCAAGCAAAT TAGTGAAGTC ATCGAGAATC TTGAACGCGA TCAAGCGCTT
GCAGAAGCCA TTAAGCTGAT TCGTGGCCCC AAAGGTTCGC AAGTCGTGAT TACGGTCTAT
CGTACCAGCG AAGAAAAGCA AATCGATATT ACGATTATAC GCGATACGAT TCCGTTGATC
AGCGTGCGCT CAAGCATGAT TGGCGATATT GGCTACATTC AATTGAGCGA ATTCAAGCAA
ACATCCTACG ATGAATTAGA CCAAGCAATT GCCAAACTCA AAACCAATAA CCCTAAGGCA
ATTATTTTTG ATTTGCGTAA CAATCCAGGC GGTTATGTCA ATCAAGCTCA AAATGTACTT
GGACGCTTTA CCAAAGATGG GGTAACCCAC TATCAAGAAA ATAGCGATGG TACGCAAAAG
GAATATCGAA CTTTGCAGCA AGGCGATGCC CAAGAATTAT TTGATCTCCC AGTTGTGGTC
TTGGTAAATG GTGGCTCAGC CAGCGCCTCG GAAATCGTCT CTGGTGCGAT GCAAGATACC
AAACGCGCAA CCCTGATTGG GGAAAAGACC TTTGGCAAGG GTTCGGTCCA AAGTGTGCAT
ACCCTGTCGG ATAAATCGGA AGCGCGGATT ACGATTGCCC ATTGGCTTAC TCCCAACAAA
CGGGCAATTC ATACGCTGGG GATTACCCCC GATTATGTTG TGCCGTTCTC GGATGATGCA
ACCCAATATC CAATTGAATG TATTTTGAAT CGCACACCTG CCGATGGGGC AACCAGTTGT
GCTGATTCAC AATTGTTCTG GGCGCTAAAG TTCTTGAACG AACAACAAAC CCCACCGCCA
CCGCCAACCC CAACGATTAC ACCAACCCCT GGCAAATAG
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| Protein sequence | MSEFQPTSGG SSTSSAKLWV VLSGIVGVLL VVAIALGAGY YWGSSSKEQT MTAANQALAT
ETAQIMQATQ QALPPANADE NFQTFWEVWN LVNKEFYHTE PIDEKQMMYG AIRGMLQSLG
DDFTGFQEPE AAERSREDMR GNFEGIGAYV EYKDGQILIV SPIEGSPAEK ANVRAGDIVV
AVDGKQISEV IENLERDQAL AEAIKLIRGP KGSQVVITVY RTSEEKQIDI TIIRDTIPLI
SVRSSMIGDI GYIQLSEFKQ TSYDELDQAI AKLKTNNPKA IIFDLRNNPG GYVNQAQNVL
GRFTKDGVTH YQENSDGTQK EYRTLQQGDA QELFDLPVVV LVNGGSASAS EIVSGAMQDT
KRATLIGEKT FGKGSVQSVH TLSDKSEARI TIAHWLTPNK RAIHTLGITP DYVVPFSDDA
TQYPIECILN RTPADGATSC ADSQLFWALK FLNEQQTPPP PPTPTITPTP GK
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