| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3110 |
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| Symbol | |
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| ID | 5734982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3923849 |
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| End bp | 3924592 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641280254 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001545876 |
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| Protein GI | 159899629 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00328118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA CCTATCGTTT TTTTGTGCCC GCCGAGGCGA TTCAGGGCGA AACGTTGGCA
GTGGCCGAGC GCGAATTGCT GCACCAATGG AACAACGTGC TGCGTTTGCG CGTTGGTCAG
CATATTGCCT TGCTCGATGG CCTTGGTATG GGCTATATTG CTGAATTGAC TAGCCTGAAC
AAGCGTGAAG CGCAAGGTCG GATTTTGCAA CGCTACGCAG CGAACGGCGA GCCAAGCATC
AATGTGACGC TTTATTTAGC GCTGACCCGT GGCGAGCGTT TTGAAATTGC CTTGCAAAAA
TGCACCGAAT TGGGAGCGAC CGCCTTTGTG CCCTTGCTGT GTGAGCGTTC GCAAGCCGAT
GTTTCGGCCA CCAAACGCGA ACGCTGGCAA CGGATTATTC GCGAGGCGGC TGAACAAGCA
GGCCGTGGGC GTTTGCCAAG CTTACACGAA GCCCAAACTG TGGCCCAAGC CTTGCCTCAA
GCCCGTGGCC ATTTGCTGTT AGCTGAAACT GGTCAGACCT TATCGTTTAA GGCAGCTTTG
GCGTTAGAAC CACGTCAAGA ACTAGCAATT TGGAGCGGGC CTGAGGGTGG TTGGAGCGAC
AACGAGCTTG AGGCAGCTCG CCAAGCAGGC CTCGTCAGCG TTAGTTTAGG CTCGCGCATT
TTACGCGCCG AGACGGCTCC GATTGCCGCC TTGGCCGCAG TGATGTTTCA ATTTGATCAG
TGGTTTAGCC CAAATTCGTG CTAG
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| Protein sequence | MKNTYRFFVP AEAIQGETLA VAERELLHQW NNVLRLRVGQ HIALLDGLGM GYIAELTSLN
KREAQGRILQ RYAANGEPSI NVTLYLALTR GERFEIALQK CTELGATAFV PLLCERSQAD
VSATKRERWQ RIIREAAEQA GRGRLPSLHE AQTVAQALPQ ARGHLLLAET GQTLSFKAAL
ALEPRQELAI WSGPEGGWSD NELEAARQAG LVSVSLGSRI LRAETAPIAA LAAVMFQFDQ
WFSPNSC
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