| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3040 |
|---|
| Symbol | |
|---|
| ID | 5734912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3839583 |
|---|
| End bp | 3840689 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641280184 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_001545806 |
|---|
| Protein GI | 159899559 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000020347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACT TAAGTAATCT TCAACTTGGG GAGTATCATC TAGCTGAGCA GATCGGCCAA
GGCGGTATGG CGGTTGTCTA TAAGGCTGAA CATCCACAGT TTGGCACAAC CGCATTTAAA
GTCTTGCCTT CAATGCTGAT CCATGTCGGC GAATTGTTAA CCCGTTTTCT CAACGAGGCT
GACGCTGTGC GGATTTTACA TCACCCGCAT ATTGTCCAAT CGTATGAGAC CGGAGCAGTG
CCCCATCCCC AACTAGACGA GGAGGTCTAT TTTATTGCGC TCGAATACAT CGAGAATGGT
TCGTTATTGG AGCGCATGAT CGCTAGCTCG CTCGCCGTCG AAGATGTGAT CAAAATGGGC
ATCGATATTG GCTATGCCTT GGAATATGCT CATAGCAAGG GGATTATTCA CCGCGATATC
AAGCCCAGCA ATATCTTATT TCGCAACAAT GGTCAAGCCG TTTTAGCCGA TTTTGGCATC
GCCAGCACGG CCCAATATAT TCGGCTCACC AAAACCGGCA ATGTCACTGG CACAATCGCC
TACATGGCCC CAGAAATTAT GCAAGAAGTG CCAGCCTCGC CACGCTCGGA CCTCTACTCG
CTGGCCTTGG TGCTCTATGA AACCTTGACC AATTCACGGC CTTTTGGCAC CGATACAGCC
TCACCACAGT TGGTGCAAAA AATCTTGCAA GAGCGAATTC CGCCACTGCA AGATGTTATA
CCGGATATTT CACCAACAAT CGCCCACGTC ATCGAACAAG CCTTGGCCAA ACAGCCAAGC
CAGCGCCAAA CATCGGTTGG TGAATTTGTC AGCCAATTGC AACATGCGCT GCAACGCCGT
ACCCCCAGCC AATTTACCAT CCCATTGCCT GAGCCATCCG AGGATCTATT GGTCGATCAG
TTTACCAAGC CCCAACAACG TAAGCCCAAG GCTAAACCGA TCGAGGTCAA TCGACCAAAT
GCGGCTGCTT CATCAACGCT TGGCATTCAA GCCAGCAATG ATCTCGCCAG CTCGCCACGG
GCAAAATTTA CGACAACCCT CCAGTTTGTG TTAATCGCAG TTGTGACCTT CTTTTTAGTC
CTAGGTATTT TTTTCATTTT TCAATAA
|
|---|
| Protein sequence | MQNLSNLQLG EYHLAEQIGQ GGMAVVYKAE HPQFGTTAFK VLPSMLIHVG ELLTRFLNEA
DAVRILHHPH IVQSYETGAV PHPQLDEEVY FIALEYIENG SLLERMIASS LAVEDVIKMG
IDIGYALEYA HSKGIIHRDI KPSNILFRNN GQAVLADFGI ASTAQYIRLT KTGNVTGTIA
YMAPEIMQEV PASPRSDLYS LALVLYETLT NSRPFGTDTA SPQLVQKILQ ERIPPLQDVI
PDISPTIAHV IEQALAKQPS QRQTSVGEFV SQLQHALQRR TPSQFTIPLP EPSEDLLVDQ
FTKPQQRKPK AKPIEVNRPN AAASSTLGIQ ASNDLASSPR AKFTTTLQFV LIAVVTFFLV
LGIFFIFQ
|
|---|
| |