Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3027 |
Symbol | |
ID | 5734884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3822786 |
End bp | 3824246 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641280171 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_001545793 |
Protein GI | 159899546 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00722625 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAC TACTCGACAT TGAAACAACC CTCATCCGCG ATGGTCGCCT CGCATCGGCA GCATGTTTGG TGGTGGCGGT TTCAGGTGGC CCGGATTCAC TAGCCTTGCT GCATCGGTTG ACGGCCTTGG CCACACCTTA TGGCTGGCGT TTGCATGTGG CCCACCTTGA TCATGGCTTG CGTGGCGAGC AATCAGCTGC CGAGGCCGCT TTTGTGGCCG AAATTGCCGC TGATTGGGGC TTAACTGCCA CAATTGAGCT GCGTGATGTT GACCAAGTTG CCAAACAATA TCATGTGGGC TTGCCTGCTG CGGCCCGAGC GACCCGCTAT CGTTTTTTGG CTGAGGTGGC TTTGCAGCAA CAAGCCGATG CGGTCGTACT CGGCCATCAA TCCGATGATC AAGCAGAAAC GGTGTTGTTG CATGTGTTGC GGGGCACAGG CCCGAGCGGC TTGAGCGCGA TGCGACCACG CACCGAGTGG GTTGGCTGGC GAGTTACCGC AGGAATGCCC CATCAAGCAG TTGGGCCAGC TTTGATTCGT CCGATGCTCA ATATTACCCG CGACGAAATT GAGGCCTATT GCGATGAACA GCAATTGGAG CCACGCCGCG ACCCAACCAA TAATTCATTG GAATATACGC GGGGCCGCAT TCGCCATCAA TTATTGCCAT TGCTCGGCGA ATACAATGCG AAAGTTGTTT CGGCCTTGGC GCGAACGGCC CGTTTAGCGG CGATTGAAAC CGACTACATG CAAAGCGAGC TTGATCGTCA ATGGCAACAT TTAATTGAGT TTGAGCCAGG GGCGATTACC TTTCATCGTG AGCAATGGAA CCACATGCAT CCAGCGTTGC AGCGCCATGC AATTCGCCGC GCGGTTTATT TATTGCGGCC TGAGCGCGAC GAATTAACAT CCTCGCAGCT TGACCATGCG TTAAGTGCCA TGAACAGCCT GCAACTGTTT TGCCAAATGC CGCATAATTT GGTCTTGCAT CGCAAGCCAC ATGGTTGGAC AATGACCGTA GCTACGACTA TGCAGCCAAC CAACGACGAA CCGCAATTGA GCATCGATGA GTGGCCGCTC AATCAACAAG GCATGACTCC GTTGCCCGAT GAACGTTGGC GGGTGATTAT GGAGCTGATG CCCAGCCGCC CTGAATATAA TCTTTCGCGC TGGCAAGGCT TGCTCGATGC CAACGCAATT CAAGGCAGAT TGATGTTACG TCAACGCCGC CCAGGCGATC GCATGCGGCC CGCAGGTGGC ATTGGCTCAC GGCGCATCCA AGATATTATG GTTGATATGC GTTTGCCACG CGAACTGCGT GCCCAATGGC CGTTATTCGT TGATGATGTT GGGATACTTT GGATTCCTGG CTTGCTGATG GCCGAACATG CCCACCCAAC GCCAGAAACA ACCAACTTTT TGCTCATAAC TTTGGAGGAT ACTCACGCCG ATGCATCCTG A
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Protein sequence | MSQLLDIETT LIRDGRLASA ACLVVAVSGG PDSLALLHRL TALATPYGWR LHVAHLDHGL RGEQSAAEAA FVAEIAADWG LTATIELRDV DQVAKQYHVG LPAAARATRY RFLAEVALQQ QADAVVLGHQ SDDQAETVLL HVLRGTGPSG LSAMRPRTEW VGWRVTAGMP HQAVGPALIR PMLNITRDEI EAYCDEQQLE PRRDPTNNSL EYTRGRIRHQ LLPLLGEYNA KVVSALARTA RLAAIETDYM QSELDRQWQH LIEFEPGAIT FHREQWNHMH PALQRHAIRR AVYLLRPERD ELTSSQLDHA LSAMNSLQLF CQMPHNLVLH RKPHGWTMTV ATTMQPTNDE PQLSIDEWPL NQQGMTPLPD ERWRVIMELM PSRPEYNLSR WQGLLDANAI QGRLMLRQRR PGDRMRPAGG IGSRRIQDIM VDMRLPRELR AQWPLFVDDV GILWIPGLLM AEHAHPTPET TNFLLITLED THADAS
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