Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_3016 |
Symbol | |
ID | 5734903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3809624 |
End bp | 3811156 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641280160 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_001545782 |
Protein GI | 159899535 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3322] Predicted periplasmic ligand-binding sensor domain |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000586353 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCTG CGCCATCAAC TGGCACGACC TCGCTGCGTC GCCAAACCAA AATTGTGCTA GGAGCCAGCC TCGTGCTGCT GGTAGCGGTA CTCATTTTTC CGCTGCGTAT CTTGTTGCTC CAATCGTTTG CCGAGCTAGA AACAACCTCA ATGCAAACCG ACCTTGATCG GGTGTTGAAT GCTTTGCAGT TTGAGCAAAA TCGCCTCGAC ACGGCCTTGG TTTCATGGTC AACCTGGGAT GATACGTATG CCTTTATCGA GGCTCCCGAT GCTGATTACA TTAGCAACAA TGCTGGCGAT GATGTTTTCG CGACCTATAA ATTTAATATT ATGGCCTTTC TCAACCAGCA ACAAGCCTTG GTGTATGGAC GAATGGCCGA GGCAGATACA TTTAATGATT TACCAGCAAA CTTTTTGCCA TTTGTGCAGC AAATTCCGCA ACTAACGACG TTTAGTGACC CCAGCCAACG TAATTTAGGC ATTGTACGTT TTCAAGAGCG CATTGTCTTG GTTGCTGCCC GCCCGATTAT TGATAGCCAA GGCCAAGGGC CAATTCGCGG CACAGTGATT TTTGGGCGCT ATCTTGATCA ACAGGTGCTT AATGATTTAG CTGCGGTCAC TCTATTTCCT TTCAGCTTGG AAGATGTGCT GAATCCACCA AGCGATCTGA CAAGCAGCAT TCAGCAATTG AGTGATGTCA ATCCCCGCCA AATCATCCCA ATCGATGAGC ATGCCTTGCG TGGCTTACAG CAAATCAACG ATCTCCAAGG CAACCCAGCC CTGATTATCA ACATTATTCG GCCACGCACA ATCTACAACC AAGGCCATCA TGCCTTGCAG TTTGTAGTAA TTTTGACCTT TCTGGTAACC GCAGTTGGTG GCTTTGTGTT GTACTTTTTG CTCAATCGAG TGGTCATCAG CCGTGTGTTG CGCTTGAGCA GCGAAATCAA ACACGTTGCC AATAATCTGA ATGAACGGGT AGCAGTGGTG GGCAACGATG AGGTTGCGGG TTTGGCGACC AGCATTAATC AAACCTTGAA TGTGCTCGAA CAAGCGCAAC GAGCAACCGC AGCCGCTGAA GCCGAGCGCA ACCAACTGCA AGCGAATACC CTGGCAGCCC AAACTGAACA ACTAGCACTC CAAGAGCAAT TAATCAAAGC CCAAGAATTT GTAATCGCCG AACAAGCTAC ACCGTTGATT CCCTTCCGCG ATGATATGTT GGTGATGCCC TTGGTCGGCG CGATCGATCA GGCACGGGCT AACCACATTT TGGGCACATT ATTGCAAGGA GTTGAGCAAC AACGCGCTCG GATCGCGATC ATCGATATTA CTGGAGTCGC TCAAATTGAT GGCTTTACCG CCGAAATGTT GCTCAAGGCC GCCAAGGCTG TGCGCTTGCT TGGTGCTCAA TTGGTGCTAA CCGGCCTCAG CCCAGAGATT GCTCAATCGT TAGTTGCCTT CGGCCAGCAG TTGAACCAAC TTACTACATT TAGCAGCTTG CAGGCAGGCA TTGCTTGGAG TATTCGGCGC TAA
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Protein sequence | MTSAPSTGTT SLRRQTKIVL GASLVLLVAV LIFPLRILLL QSFAELETTS MQTDLDRVLN ALQFEQNRLD TALVSWSTWD DTYAFIEAPD ADYISNNAGD DVFATYKFNI MAFLNQQQAL VYGRMAEADT FNDLPANFLP FVQQIPQLTT FSDPSQRNLG IVRFQERIVL VAARPIIDSQ GQGPIRGTVI FGRYLDQQVL NDLAAVTLFP FSLEDVLNPP SDLTSSIQQL SDVNPRQIIP IDEHALRGLQ QINDLQGNPA LIINIIRPRT IYNQGHHALQ FVVILTFLVT AVGGFVLYFL LNRVVISRVL RLSSEIKHVA NNLNERVAVV GNDEVAGLAT SINQTLNVLE QAQRATAAAE AERNQLQANT LAAQTEQLAL QEQLIKAQEF VIAEQATPLI PFRDDMLVMP LVGAIDQARA NHILGTLLQG VEQQRARIAI IDITGVAQID GFTAEMLLKA AKAVRLLGAQ LVLTGLSPEI AQSLVAFGQQ LNQLTTFSSL QAGIAWSIRR
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