Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2990 |
Symbol | trpC |
ID | 5734862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3776641 |
End bp | 3777459 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641280134 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_001545756 |
Protein GI | 159899509 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.508852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCGA CAATTCTAGA TCAGATTTTT GCCCATAAAC GCACCGAGGT CGAGCGCCAA AAATTGAAGA TCCCCCAAGC TAAACTTGAA CAACAACTTG GCAACGCCCC CAAGCCGCGT AGCTTGCGCC AAGCCTTGCG CCAACCTGAT CGGATTAGCT TGATCGCTGA GGTCAAAAAG GCCAGTCCAT CCAAAGGGGT CTTTTTAGAG AATTTCAACC CAACTGAACT AGCTGAAACC TACGCTAGCA ATGGGGCGGC TGCGATTTCG GTGTTAACTG ATGTGCGCTT TTTTCAAGGC AGCTTAATCT ATTTACGCTC AATTCATGAG CACCTTGATA CATTGGGCTA TGCTACGCCC CTGTTGCGCA AAGATTTTCT CTATGATCCC TATCAAATTT ATGAGGCCCG CGTATCGGGA GCCGATGCAA TTTTGTTGAT CGTGGGCATG CTCGATGATC AAACGCTGCA TGAGTTGTAT CAATTAACCT ATGGCTTGGG TATGGAAGCC TTGGTTGAGG TGCATACTGA GGCTGAAATG GCCCGTGCTC AGGCATTACA AGCCCAAATT ATCGGCATCA ACAATCGTGA TCTGCATAGT TTTAGCGTTG ATCTTGCGAC AACTCAACGG GTTAGCGCTA GTTTGCCTGC AATTGGCGAC CCTCAGCGGC CTGTGTTGGT GGCCGAAAGT GGCATCCATG GCCCTGATGT GCTGCCAACG TTGCGTGAAT GGGGTGTTGA GGCAATTCTC GTAGGCGAAT CGATCGTGCT AGCCCCCGAT CATGCGGCCC ATGTTCGCGC CTTGAGCCAA AAAGCGTAA
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Protein sequence | MTATILDQIF AHKRTEVERQ KLKIPQAKLE QQLGNAPKPR SLRQALRQPD RISLIAEVKK ASPSKGVFLE NFNPTELAET YASNGAAAIS VLTDVRFFQG SLIYLRSIHE HLDTLGYATP LLRKDFLYDP YQIYEARVSG ADAILLIVGM LDDQTLHELY QLTYGLGMEA LVEVHTEAEM ARAQALQAQI IGINNRDLHS FSVDLATTQR VSASLPAIGD PQRPVLVAES GIHGPDVLPT LREWGVEAIL VGESIVLAPD HAAHVRALSQ KA
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