| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2969 |
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| Symbol | |
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| ID | 5734841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3745721 |
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| End bp | 3747295 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641280113 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001545735 |
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| Protein GI | 159899488 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TTTTGAGTGG CCTGCTTTTA GCCGGGGTGA TTGTGGGCTG TGGCGGCCAA
GCAACTCCAA CCGCTGTTCC GGCAACAGTG ACCAGCCAAT CAACCCCAAC CAGCCAAGCC
TTGAATCCAA CCGCTACTGC CGCTACTGTG GTTGATAACT CAATTACGCC AACGCCATTG
CCAACCAAAC CAACAGCCCC AATCTTTACC GCTGACGATG AGCGTTGGGC TGGCCGTTCG
ATCTACTTTA TTATGATCGA TCGCTTTGCC AATGGCGACC CAAGCAACGA CAACGCCGAT
GGCTTTGGGG CAGATCGTAG CGATCCACGG CGTTGGCATG GCGGCGATTT TCGCGGCATT
ATCGAGCGGC TCGATTACAT CAAAGGCATG GGCTTTGGCG GCATTTGGAT CACGCCAGTC
AGTAAGCAAA ATTCAACCAA TGCCTACCAT GGCTACTGGC AATACGACCC CTACCAAATT
GACCCGCATT TTGGCACGCT GGAAGAATTG CGCGAATTGG TCAGCGAAGC CCACAAACGC
GATATATTGG TGATGCTCGA TGTTGTGCCC AATCATATGG GCGATTTCTT GCCTGGCTCG
AAAGCTGCCC CGCCATTCGA TGACCCAACC TGGTATCACA ACAAGGGCAA CATTCAAAAT
TATGGCAATC AACAAGAGGT TGAAGATGGC GATTTGCTCG GGCTTGATGA TTTAGATCAG
GATAATCCTG CTACCCGTGC TGAATTACTC AAATGGATTG CTTGGCTTAA AACCGAAACT
GGGCTTGATG GCTTGCGAGT TGATACGGCC AAACATTTGC CCAAAGATTT TCTCCGTGAG
TTTGATCAAG CGGCCAATAC GTTTTCGCTG GCTGAGGTAT TTAGCAGCGA TGCGGGCTAT
GTTGCGCCCT ACACCGAATT TAACGACGCA ATTTTGGATT ACCCCTTGCA CAGCGCCTTT
AAAGAAAGTT TAGTCGGTGG TCGCACGTTG TTGGTGATTC AGCGCGTGCT CGAAAATGCC
GATCAACAGT ATCGCAATGT CCATGTCAAC GGCACATTTC TCGATAATCA CGATAACGAG
CGCTTTTTAT GCTTGGCAAC TGGCGGCCCC AACGCCGATA AAACCACTCA ATTGCGGCAA
GCTTTGGCGG TGCTCTATAG TTTGCGTGGC ATTCCGATTG TCTATTATGG CACCGAGCAA
GAACTCAACG GCTGCAAAGA TCCCTTCAAC CGCGAAGATG CCTTTGAATT GAATGCGACT
GATGTACCAG TCTATCAATG GATCAGCCAA CTCAACCAGA TTCGCCAAGC CCATCCAGCC
TTGCAACGTG GCACACTCGA AAGCCGCACA ACTCCTAGCG ATGCATGGGC CTTTCAACGC
ACGGCGGGCA ACGATACGGT CGTAGTTTGC ATCAATAACA CATGGAAATC GCTCGACTTG
GCAGTAACTG GTTTGACTGA AATTGCTGAT GGTGAGGTGT TGACTGATGC GCTTGGTAGC
GGTCAAATGA GCGTTAAAAA TGGCGAAATG AATTGTGCTC TACAACCAAA ACAGGTGCTG
ATCTATACCC GTTAA
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| Protein sequence | MKKLLSGLLL AGVIVGCGGQ ATPTAVPATV TSQSTPTSQA LNPTATAATV VDNSITPTPL
PTKPTAPIFT ADDERWAGRS IYFIMIDRFA NGDPSNDNAD GFGADRSDPR RWHGGDFRGI
IERLDYIKGM GFGGIWITPV SKQNSTNAYH GYWQYDPYQI DPHFGTLEEL RELVSEAHKR
DILVMLDVVP NHMGDFLPGS KAAPPFDDPT WYHNKGNIQN YGNQQEVEDG DLLGLDDLDQ
DNPATRAELL KWIAWLKTET GLDGLRVDTA KHLPKDFLRE FDQAANTFSL AEVFSSDAGY
VAPYTEFNDA ILDYPLHSAF KESLVGGRTL LVIQRVLENA DQQYRNVHVN GTFLDNHDNE
RFLCLATGGP NADKTTQLRQ ALAVLYSLRG IPIVYYGTEQ ELNGCKDPFN REDAFELNAT
DVPVYQWISQ LNQIRQAHPA LQRGTLESRT TPSDAWAFQR TAGNDTVVVC INNTWKSLDL
AVTGLTEIAD GEVLTDALGS GQMSVKNGEM NCALQPKQVL IYTR
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