Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2967 |
Symbol | |
ID | 5734839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3742888 |
End bp | 3743544 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641280111 |
Product | winged helix family two component response transcriptional regulator |
Protein accession | YP_001545733 |
Protein GI | 159899486 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGATC AGCCAGTGCC ATCGCTAACA ATTAAGAACC AAGATGTGCC ACCGCGACTT ATGTCATGGG AACAAACCAT TCTCACCATC GGACGCGATG TGGCCAACGA TATTGTCATC GATCATCGTT TAGCATCGCG CCGTCACGCC CGCTTGGAAC GCGATGAAGC CGGCTGTTAT ATTCGCGATC TCGATAGCAC CAACGGAACT TATTTAAATG GGGTTAAGGT CAATGGCCTC GCACCCTTAC GCAATAACGA CGAAGTTTGG GTCGCCGATA CGGTGATCAT TTTTCGCGAT CCCGAAGCAA CTATGAAAGG CACGCCGCCG CCTGTGGTGA TGCATCGGAT CGCCACCCAA GATCAAGCTG AATTGCACGT TGATAGTGCT GCCAAGGAAG TTTATGTGCG GGGTAAACGG CTTGACCCAC AACTCACCGC CAAGGAATTT CAGCTGCTAG AGCTGCTCTA CAATCGCCGT GGCGAGGTCG TGAGTAAAGA GCAAATTGCG ATTGGCGTGT GGGATTATGA GGTCTACGAT TACAATGCCA TCGACGCTTT GATCTATCGT TTGCGCCAAC GCATCGAGAT CGATCCATCT GCGCCACGCT TTGTGCTGAC TGTGCGCGGC TTTGGCTATA AATTGAGCTT AGATTAA
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Protein sequence | MSDQPVPSLT IKNQDVPPRL MSWEQTILTI GRDVANDIVI DHRLASRRHA RLERDEAGCY IRDLDSTNGT YLNGVKVNGL APLRNNDEVW VADTVIIFRD PEATMKGTPP PVVMHRIATQ DQAELHVDSA AKEVYVRGKR LDPQLTAKEF QLLELLYNRR GEVVSKEQIA IGVWDYEVYD YNAIDALIYR LRQRIEIDPS APRFVLTVRG FGYKLSLD
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