Gene Haur_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2960 
Symbol 
ID5734832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3734463 
End bp3736271 
Gene Length1809 bp 
Protein Length602 aa 
Translation table11 
GC content54% 
IMG OID641280104 
Productserine/threonine protein kinase with PASTA sensor(s) 
Protein accessionYP_001545726 
Protein GI159899479 
COG category[R] General function prediction only
[T] Signal transduction mechanisms
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.602152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AACCACGAAT TCTCAATAAT CGCTATCAAT TAGAGCGAAA ACTAGGCCAA 
GGCGGCATGG CAACGGTCTA TCTTGGGCGC GATTTGCGAC TCAATCGACC AGTTGCGATT
AAAGTGTTAC ATGGCCAATA TGCCAGTGAC GAACAATTTT TGCGCCGCTT TAAGCACGAA
GCCGATGCCG CCGCCCAATT GGGGCATCCC AATATTGTGC GGGTTTATGA TATCGGGGCC
GAGGGCGATC TGCATTATAT TGTGATGGAA TATGTCCAAG GTACCGATCT CAAAGAAATT
ATTTCGTTGC AAGCCCCCTT GCCAGTGCCC CGCACCTTAG CGATTGTGCG TCAAGTGGCC
GAGGCCTTGC AAGCCGCCCA TGATAGCGGT TTGGTGCACC GTGATGTCAA GCCGCAAAAT
GTCTTGATTG ATACCAATGA TTATGCGCGG CTCAGCGATT TTGGCATCGC CAAAAGCAAG
CAATCCTCGG CATTAACCGA CCCAGGCACA ACCTTTGGGA CTGCCGATTA TCTTGCGCCA
GAACAGGCTC AAGGTTTGGG CGCAACGCCG CTTTCCGATG TCTATGCCTT GGGCGTGCTA
ACCTATGAGA TGCTGACCGG ACGTTTGCCG TTTAGTGGCG ATTCGCCTTT GGCAGTCGCC
TTGCAGCATA TTCAGGCAGC ACCGCCGCCT TTGCTCAGCT ATAATCCGTC GATTCCGCCG
CAGCTTGAGG CGATTGTACT CCAAGCGATG GCAAAAGATC CGGCTCAACG CCCACAATCG
GCGCGAGCGT TTGCCGAGTT GTTGCGGCTA TATCGTGAGC GCGGCAACCA AGCGACCATG
GCTGTGCCTT CGTCGAATGC TGGCCGTTTG CCGCAAACCC AAGAGCCTGC CGAGGTGCGT
CCGCCCCGTC AACAACCAGC GCCGCCAGCT CGCCCGCGCC AAAATTATGC TCCACCCTTG
GCCGCCCAAC ATCCCGTGCC AATGAACCAA CCCCAATCAC GCCAATCATC TGGTTGCGGC
TTATGGGTGA TTGCCACTTT CTTATTGGTC GGAATTGGCG GTTTGGTCTA TGTGCTGATG
TTTACTGATG TGATGCAATC GATCAGCCAG GCTTTTGGTG GAAATAAGCC GACCCAAGTT
GCCCCAACGG GTGAGCCAAC TCCCGCCCCA GAAATGGTTG AAGTCCCCGA TTTGGTTGGC
CGAACCGAAA GCGAAGCGCT TGATCTACTT AAATCGCTGG AGCTTGGCGA ACAACGCAAA
GAGCCACGCA ACGATCTTGC GCCAGCCGCA ACCGTAATCG GCCAAGATGT TGCTGCTGGA
ACCAAGGTCG CTAAAGGCAC GGTCATTCCG TTTACCTTAA GTTTAGGGCC AGCCCAAGTT
GAAATTCCCG ATGTAACCCG CCAACAATTC GATGCCGCCT CGGATGCGTT GATTCGGGCT
GGTTTTAAAG TTCGGCGCAC CGACACGCCC GATCAAACGA TTCCAGCGGG CTTTGTCTTA
CGCCAAAATC CGCCAGCAGG CTTGAAATTG GCTCAAGGCA GCGAGATTGA ATTGGTCGTG
AGCGTCGGCG ATCTGGTAAT GTTCCCTGAT CTGATTGGCC GCCAGCGGGC TGAGGCTGAG
GCAATTTTGG CGACACGCAG CGATTTACGC CTCGATATTG TCGATGAACA AGGGCCAGAT
TTGATTCCCA ATTTTGATAG CATCGCAGCA AATACGGTGG TGAGTGCAAC CGCCAATGGT
CAGCCAATCG ATAATGGAGC CTTGATTCCG CGTGGTAGCA TAATTGTGCT TGGGGTGCGT
CGCCCATAA
 
Protein sequence
MSEQPRILNN RYQLERKLGQ GGMATVYLGR DLRLNRPVAI KVLHGQYASD EQFLRRFKHE 
ADAAAQLGHP NIVRVYDIGA EGDLHYIVME YVQGTDLKEI ISLQAPLPVP RTLAIVRQVA
EALQAAHDSG LVHRDVKPQN VLIDTNDYAR LSDFGIAKSK QSSALTDPGT TFGTADYLAP
EQAQGLGATP LSDVYALGVL TYEMLTGRLP FSGDSPLAVA LQHIQAAPPP LLSYNPSIPP
QLEAIVLQAM AKDPAQRPQS ARAFAELLRL YRERGNQATM AVPSSNAGRL PQTQEPAEVR
PPRQQPAPPA RPRQNYAPPL AAQHPVPMNQ PQSRQSSGCG LWVIATFLLV GIGGLVYVLM
FTDVMQSISQ AFGGNKPTQV APTGEPTPAP EMVEVPDLVG RTESEALDLL KSLELGEQRK
EPRNDLAPAA TVIGQDVAAG TKVAKGTVIP FTLSLGPAQV EIPDVTRQQF DAASDALIRA
GFKVRRTDTP DQTIPAGFVL RQNPPAGLKL AQGSEIELVV SVGDLVMFPD LIGRQRAEAE
AILATRSDLR LDIVDEQGPD LIPNFDSIAA NTVVSATANG QPIDNGALIP RGSIIVLGVR
RP