Gene Haur_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2956 
Symbol 
ID5734828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3729941 
End bp3730774 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID641280100 
Productalpha/beta hydrolase fold 
Protein accessionYP_001545722 
Protein GI159899475 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATA CAACGGCAAC ATTTACAGGC GGCAACAACA CGACGATTTT TTATCAAACA 
TGGCGGCCAG CTGCGCCCAA AGCCACCGTG GTGGTGGTGC ATGGCTACGC CGAACATAGC
GGGCGTTATC AACATGTAGC CGAGGCCTTG GTTGCGGCCA ATTATAGTGT TTGGGCGCTT
GATCATCGTG GCCATGGGCA ATCGCAAGGC AATCGCGCAA CGGTCAAACA TTTCGATGAA
TTTGTCAACG ATTTAGCCAG TTTTGTGCGC TTGGTGCGCG ATAAAGAGCC AAATGGCCCG
TTATTTATGC TTGGCCATAG CATGGGTGGT TTGATCAGCA CGCTCTACAC GTTGGACTAT
GGACATAATT TGCATGGCTT GGTTTTGACT GGCCCAGCCT TCAAAGTTGA TGCCACAACT
CCCAAAGTGG TGGTAAAAGT TGGGGCGTTT ATTAGCAAAT TTCTGCCAAA CCTACCAGTT
GCCCCATTCG ATCCCCAGTG GAACAGCCGC GATCCCAAGG TAGTCGAGGC CTTCAAGGCT
GATCCCTTGA ATTACAAAGG TGGCATCAAA GCCCAAATGG GCACATCGAT GATCAATGCA
ACCAAAGTGA TCGACCAACG CGCCCACGAA ATTAGCTTGC CAGTGCTGCT CTTGCAAGGC
TTAGCTGATC GCTTGGTTAG CCCTGCTGGC GCGATGCATG CCTTTGGATT GTTCAAATCG
CAAGATAAAA CCCTGCATAG CTACCCTGGC TTGTATCATG AAGTGCTGAA CGAGCCAGAA
CAAACCACAT TAATCCCCTT AGTTATTGAA TGGCTTGATG CGCATATGGC CTAA
 
Protein sequence
MEHTTATFTG GNNTTIFYQT WRPAAPKATV VVVHGYAEHS GRYQHVAEAL VAANYSVWAL 
DHRGHGQSQG NRATVKHFDE FVNDLASFVR LVRDKEPNGP LFMLGHSMGG LISTLYTLDY
GHNLHGLVLT GPAFKVDATT PKVVVKVGAF ISKFLPNLPV APFDPQWNSR DPKVVEAFKA
DPLNYKGGIK AQMGTSMINA TKVIDQRAHE ISLPVLLLQG LADRLVSPAG AMHAFGLFKS
QDKTLHSYPG LYHEVLNEPE QTTLIPLVIE WLDAHMA