Gene Haur_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2888 
Symbol 
ID5734759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3659069 
End bp3659722 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content53% 
IMG OID641280031 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001545654 
Protein GI159899407 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0334106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATT CTTCAACCGC GATCGCCCAA CTGTTGCTCG AGGCCGGAGC GGTGGTGCTT 
TCGCCTGATC GACCGTTTCG CTTTGCATCG GGCATTCTTT CGCCAATTTA TTGCGATAAT 
CGTTTGTTGT TGGCCCAAGT TAGCGCCCGC CGCACCATCA CTGAAGCTAT GTGCCAACAA 
ATTAGCGATG AATTATTGAA CACCGAAGTA ATTGCTGGAA CGGCCACTGC TGGCGTGCCA 
TGGGCGGCGT GGGTTGCCCA TGAATTAAGT TTGCCAATGG CCTATGTTCG TTCAGGAGCC 
AAAAAATATG GCCGTGGTCA GCAGGTTGAA GGCGGGGTGC AAGCCAATCA GCGGGTCGTC 
GTGATCGAAG ATCTGATCAG CACGGGCGGT AGCTCGCTCG ATGCCGTGGC AGGGTTACGT 
CAGATTAACG CACTTGTGGC CGATTGTTTT GCGATCTTTA CCTATGAGAT GGAAGAATCG 
AAGCAGCGCT TTAATGCTGC TGGCGTGCGC TTGATGACCT TGACCAATCT TTCGACTTTG 
TTGGATGTTG CGGCCCAACA AAACTACATT CGGGCCGAAC ATCGCAGCTT AATCAGCGAT 
TGGGCCAGTG ATCCGGCTGG TTGGGCTGAT CGGGCTGGAA TTAGCGCTGA GTAA
 
Protein sequence
MKHSSTAIAQ LLLEAGAVVL SPDRPFRFAS GILSPIYCDN RLLLAQVSAR RTITEAMCQQ 
ISDELLNTEV IAGTATAGVP WAAWVAHELS LPMAYVRSGA KKYGRGQQVE GGVQANQRVV 
VIEDLISTGG SSLDAVAGLR QINALVADCF AIFTYEMEES KQRFNAAGVR LMTLTNLSTL 
LDVAAQQNYI RAEHRSLISD WASDPAGWAD RAGISAE