Gene Haur_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2874 
Symbol 
ID5734745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3646394 
End bp3647362 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content43% 
IMG OID641280017 
Producthelix-turn-helix type 11 domain-containing protein 
Protein accessionYP_001545640 
Protein GI159899393 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAG CATTCTGTCA CCATTCTAAA ATTGTGGGCA AAAAGAGGAT GCTGATGGAT 
AAAGTGGAAC GACTCATCTC GATTATTATG ATCTTGCTGA AAAAAGAACT TGTTTCAGCC
AACGAATTCG CCCAATTATT CAACGTTTCT AAAAGGACGA TCCTGCGCGA TATGGATGCA
TTGAGTTTGG CGAACATCCC GATCTACGCG GTTCATGGGG TCAACGGCGG CTATGGCATT
ATGCAAGAAT ACAAGGTTGA TAAACGCCTC TTAAGTAGCT CCGATTTACA AAATATATTA
ACTGCGCTCA GCGGACTAGA ACAAATCTTC CTGCCTGAAG AGGTTGAAAG AACGATTAAA
AAAATTGAGG CAATGGTTGG TCAATTGGCA TTGAATCGTG CGATTTACTT GTCATTTTAT
GCTTGGGAAG GTCGGTCTGA GCTACTTGAA ACCCTCAAGA CCTGCCAAGA ATCTATATTA
AAGAAAAGAC TGGTTTTGTT TGATTATACG GATAAAGATG GAACTATAAC GCAGCGAATG
ATCGAACCCT ACGAGCTGCA TTTTAGCGAA TCAACTTGGT ATTTGAAAGG ATTCTGTTTA
GATCGCCAAG CCTATCGAAG TTTCAAATTA GCGCGGATCG ATCACATGAC GATGGATACC
CGCGTATTTC CTTCGCGAGA TAATAGCACT ACACAAGGCC ACGAAGCCCC GTACCTGCCG
CAACTGATCA CGATTAAGGC TTGGATCGCG CCCAGCATCA AAGACCAAAT TATCGAACGC
TATGGGCGCA AAAATCTTGA AGTTCAGCAT TCTGGTGTAT TGCTAGCAAC TATGGAGATT
CCACACAATC AGCTGGGATT TCAATTTTTA GCCAGCTTCG GCAGGCAGCT CAAAGTTGTT
GAGCCACAAG CCTATGTTGA AGATTTTCAG CAGTATTTAG CTCAAATGCT TGCCCACTAT
TCTTCATAA
 
Protein sequence
MMTAFCHHSK IVGKKRMLMD KVERLISIIM ILLKKELVSA NEFAQLFNVS KRTILRDMDA 
LSLANIPIYA VHGVNGGYGI MQEYKVDKRL LSSSDLQNIL TALSGLEQIF LPEEVERTIK
KIEAMVGQLA LNRAIYLSFY AWEGRSELLE TLKTCQESIL KKRLVLFDYT DKDGTITQRM
IEPYELHFSE STWYLKGFCL DRQAYRSFKL ARIDHMTMDT RVFPSRDNST TQGHEAPYLP
QLITIKAWIA PSIKDQIIER YGRKNLEVQH SGVLLATMEI PHNQLGFQFL ASFGRQLKVV
EPQAYVEDFQ QYLAQMLAHY SS